RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 BMS1Q14692 1282 aaKnown RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 NFIXQ14938 502 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 CLEC16AQ2KHT3 1053 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 GORABQ5T7V8 394 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 LARP1BQ659C4 914 aaKnown RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 DBX2Q6ZNG2 339 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF513Q8N8E2 541 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 JMYQ8N9B5 988 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 SMARCC1Q92922 1105 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF669Q96BR6 464 aaPredicted RBP3.96□□□□□ -1.78
PSPC1-208ENST00000635562 SLC6A18Q96N87 628 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 KCNC2Q96PR1 638 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 C19orf44Q9H6X5 657 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 KCNK12Q9HB15 430 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 CRTAC1Q9NQ79 661 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 ST7Q9NRC1 585 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 SLC52A1Q9NWF4 448 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 RTEL1Q9NZ71 1219 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 SUSD2Q9UGT4 822 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 KCTD3Q9Y597 815 aa3.96□□□□□ -1.78
PSPC1-208ENST00000635562 TLDC2A0PJX2 215 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 U2SURPO15042 1029 aaKnown RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 SHOXO15266 292 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 PDPK1O15530 556 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 BMP7P18075 431 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 ENDOUP21128 410 aaKnown RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 GBP1P32455 592 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 KIR2DL1P43626 348 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 KIR2DL2P43627 348 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF143P52747 638 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 RNF4P78317 190 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 TEKQ02763 1124 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 NCAPHQ15003 741 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 ANKRD39Q53RE8 183 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 NBPF12Q5TAG4 269 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 SPTY2D1Q68D10 685 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 VHLLQ6RSH7 139 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 JAZF1Q86VZ6 243 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 NLGN1Q8N2Q7 840 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 GPATCH11Q8N954 259 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 MARCH10Q8NA82 808 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 ST13P5Q8NFI4 369 aaPredicted RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 CXorf38Q8TB03 319 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 LINC01599Q8WXQ3 324 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 MRFAP1L1Q96HT8 127 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 SIGLEC10Q96LC7 697 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 DHRS1Q96LJ7 313 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 KREMEN1Q96MU8 473 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 SRPK1Q96SB4 655 aaKnown RBP3.95□□□□□ -1.78
PSPC1-208ENST00000635562 PCDHB10Q9UN67 800 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 IRAK3Q9Y616 596 aa3.95□□□□□ -1.78
PSPC1-208ENST00000635562 FAM86C2PA6NEL3 165 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 WASH4PA8MWX3 477 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 CBFA2T2O43439 604 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 SUSD5O60279 629 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 FOXD2O60548 495 aaPredicted RBP3.94□□□□□ -1.78
PSPC1-208ENST00000635562 CLEC3AO75596 197 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 DDAH1O94760 285 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 CAPNS1P04632 268 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 MCCP23508 829 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 SLC7A5Q01650 507 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 TMEM62Q0P6H9 643 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 BBS9Q3SYG4 887 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 TIGD5Q53EQ6 642 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 AXDND1Q5T1B0 1012 aaPredicted RBP3.94□□□□□ -1.78
PSPC1-208ENST00000635562 KIAA1211LQ6NV74 962 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 SP8Q8IXZ3 490 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 CNPY4Q8N129 248 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 LILRB2Q8N423 598 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 C20orf173Q96LM9 149 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 KLHL25Q9H0H3 589 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 EPN3Q9H201 632 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 GCM1Q9NP62 436 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF281Q9Y2X9 895 aa3.94□□□□□ -1.78
PSPC1-208ENST00000635562 A0A0G2JLL6 359 aaPredicted RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 NRDCO43847 1150 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 PCBP3P57721 371 aaKnown RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SLC14A2Q15849 920 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SLC10A6Q3KNW5 377 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 GNPTABQ3T906 1256 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 ADGRF1Q5T601 910 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 TDRD10Q5VZ19 366 aaKnown RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF662Q6ZS27 426 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 NLRX1Q86UT6 975 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 TMTC2Q8N394 836 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 DAGLBQ8NCG7 672 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SYTL5Q8TDW5 730 aaPredicted RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SGSM3Q96HU1 749 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 ZNF512BQ96KM6 892 aaPredicted RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 RNPC3Q96LT9 517 aaKnown RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 HAUS7Q99871 368 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SIRT5Q9NXA8 310 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 PRR13Q9NZ81 148 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 ZMYM5Q9UJ78 669 aa3.93□□□□□ -1.78
PSPC1-208ENST00000635562 LAS1LQ9Y4W2 734 aaKnown RBP3.93□□□□□ -1.78
PSPC1-208ENST00000635562 SSU72P8A0A1W2PR75 194 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 ENPP3O14638 875 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 PSPNO60542 156 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 RAB11FIP3O75154 756 aa3.92□□□□□ -1.78
PSPC1-208ENST00000635562 EPHX1P07099 455 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms