RNA–Protein interactions for RNA: ENST00000634772.1

SMARCA2-228, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 810 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-228ENST00000634772 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 SIAH1Q8IUQ4 282 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 TRIM22Q8IYM9 498 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 RNF26Q9BY78 433 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 C11orf49Q9H6J7 331 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 MTMR10Q9NXD2 777 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 MORF4L1Q9UBU8 362 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
SMARCA2-228ENST00000634772 SNHG28P0DPA3 235 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 COL6A1P12109 1028 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 TIE1P35590 1138 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 PKP1Q13835 747 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 RAB11FIP4Q86YS3 637 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 TDHQ8IZJ6 230 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 SIPA1L1O43166 1804 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 FOCADQ5VW36 1801 aa11.3□□□□□ -0.6
SMARCA2-228ENST00000634772 USP17L5A8MUK1 530 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 DEXIO95424 95 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 GH2P01242 217 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 ASNSP08243 561 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 CYP2B6P20813 491 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 AKAP17AQ02040 695 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 SEPT2Q15019 361 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 FBXO18Q8NFZ0 1043 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 USP6NLQ92738 828 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 GBP4Q96PP9 640 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 ZSCAN16Q9H4T2 348 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 MAD2L2Q9UI95 211 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 MYH1P12882 1939 aa11.29□□□□□ -0.6
SMARCA2-228ENST00000634772 UNC80Q8N2C7 3258 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 H3BQV1 296 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 F13A1P00488 732 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 PDHBP11177 359 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 MTMR2Q13614 643 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 CCL14Q16627 93 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 Q3C1V9 767 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 GPATCH4Q5T3I0 446 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 GMCL1P1Q8NEA9 526 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 PHKBQ93100 1093 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 SLC26A6Q9BXS9 759 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 RBPJLQ9UBG7 517 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
SMARCA2-228ENST00000634772 TTLL13PA6NNM8 815 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 KLRF2D3W0D1 207 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 F5H6K3 240 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 DTNBO60941 627 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 GDF11O95390 407 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 PLEKHA8P1O95397 391 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 BAG4O95429 457 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 XBP1P17861 261 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 MCM4P33991 863 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 BACE1P56817 501 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 ICA1Q05084 483 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 KLRC3Q07444 240 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 ZNF543Q08ER8 600 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 PKN1Q16512 942 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 DCAF4Q8WV16 495 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 SPZ1Q9BXG8 430 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 PORCNQ9H237 461 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.61
SMARCA2-228ENST00000634772 CUL9Q8IWT3 2517 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 VPS37CA5D8V6 355 aaPredicted RBP11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 PTMSP20962 102 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 HERVK_113P62684 666 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 ATP2B2Q01814 1243 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 TRIM29Q14134 588 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 MORN1Q5T089 497 aa11.26□□□□□ -0.61
SMARCA2-228ENST00000634772 SLFN13Q68D06 897 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms