RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-229ENST00000633522 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
LINC01002-229ENST00000633522 ASIC4Q96FT7 647 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 NOL10Q9BSC4 688 aaKnown RBP13.4□□□□□ -0.26
LINC01002-229ENST00000633522 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 LRP2BPQ9P2M1 347 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 TMX2Q9Y320 296 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 OTOGLQ3ZCN5 2332 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 FAM208BQ5VWN6 2430 aa13.4□□□□□ -0.26
LINC01002-229ENST00000633522 H0Y858 1186 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 RBAK-RBAKDNI3L0D1 243 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 PITPNM1O00562 1244 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
LINC01002-229ENST00000633522 GJB5O95377 273 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 ZXDAP98168 799 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 FSCN1Q16658 493 aaKnown RBP13.39□□□□□ -0.27
LINC01002-229ENST00000633522 TMEM63BQ5T3F8 832 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 ARMCX2Q7L311 632 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
LINC01002-229ENST00000633522 MBTPS2O43462 519 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 CYP2E1P05181 493 aaPredicted RBP13.38□□□□□ -0.27
LINC01002-229ENST00000633522 AVPR2P30518 371 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 COPB2P35606 906 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
LINC01002-229ENST00000633522 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
LINC01002-229ENST00000633522 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 RAD9AQ99638 391 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 C17orf80Q9BSJ5 609 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 PPP1R9AQ9ULJ8 1098 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 FAM50BQ9Y247 325 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 ASPMQ8IZT6 3477 aa13.38□□□□□ -0.27
LINC01002-229ENST00000633522 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
LINC01002-229ENST00000633522 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
LINC01002-229ENST00000633522 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
LINC01002-229ENST00000633522 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
LINC01002-229ENST00000633522 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC01002-229ENST00000633522 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
LINC01002-229ENST00000633522 SMPD1P17405 629 aa13.36□□□□□ -0.27
LINC01002-229ENST00000633522 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
LINC01002-229ENST00000633522 POP1Q99575 1024 aaKnown RBP13.36□□□□□ -0.27
LINC01002-229ENST00000633522 BAZ2AQ9UIF9 1905 aaKnown RBP13.36□□□□□ -0.27
LINC01002-229ENST00000633522 SUPT20HL2P0C7V6 817 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
LINC01002-229ENST00000633522 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
LINC01002-229ENST00000633522 TIGD5Q53EQ6 642 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 TTC6Q86TZ1 520 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 FBXO22Q8NEZ5 403 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
LINC01002-229ENST00000633522 RMDN1Q96DB5 314 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 CTAGE1Q96RT6 745 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 SNRKQ9NRH2 765 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 PTPRCP08575 1304 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 ZZEF1O43149 2961 aa13.35□□□□□ -0.27
LINC01002-229ENST00000633522 LOC730098B7Z3J9 87 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 IGSF3O75054 1194 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 NUBP1P53384 320 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 DDX11Q96FC9 970 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 PRKRIP1Q9H875 184 aaPredicted RBP13.34□□□□□ -0.27
LINC01002-229ENST00000633522 PIH1D3Q9NQM4 214 aaKnown RBP13.34□□□□□ -0.27
LINC01002-229ENST00000633522 ZFYVE26Q68DK2 2539 aa13.34□□□□□ -0.27
LINC01002-229ENST00000633522 MYO10Q9HD67 2058 aa13.33□□□□□ -0.27
LINC01002-229ENST00000633522 GALR2O43603 387 aaPredicted RBP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 CXCL10P02778 98 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 KCNJ6P48051 423 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 HTRA4P83105 476 aaPredicted RBP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 CNTN2Q02246 1040 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 SIGLEC14Q08ET2 396 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 MIGA1Q8NAN2 632 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 CTNNA3Q9UI47 895 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 Q9Y3F1 56 aa13.33□□□□□ -0.28
LINC01002-229ENST00000633522 DDX49Q9Y6V7 483 aaKnown RBP13.33□□□□□ -0.28
LINC01002-229ENST00000633522 H3BNC9 293 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
LINC01002-229ENST00000633522 TBX10O75333 385 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 UQCRFS1P1P0C7P4 283 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 USP5P45974 858 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 SMAD4Q13485 552 aaKnown RBP13.32□□□□□ -0.28
LINC01002-229ENST00000633522 EPC2Q52LR7 807 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 ADSSL1Q8N142 457 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 ZBED2Q9BTP6 218 aa13.32□□□□□ -0.28
LINC01002-229ENST00000633522 NSUN3Q9H649 340 aaKnown RBP13.32□□□□□ -0.28
LINC01002-229ENST00000633522 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms