RNA–Protein interactions for RNA: ENST00000629670.1

CCDC163-208, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-208ENST00000629670 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 EPHB4P54760 987 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 SNAP25P60880 206 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 NKX3-2P78367 333 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 AAMPQ13685 434 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
CCDC163-208ENST00000629670 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 Q9Y3F1 56 aa13.16□□□□□ -0.3
CCDC163-208ENST00000629670 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 ADCY6O43306 1168 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 FGAP02671 866 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 FGRP09769 529 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 FOSL2P15408 326 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 BEX3Q00994 111 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
CCDC163-208ENST00000629670 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
CCDC163-208ENST00000629670 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 KIAA1211Q6ZU35 1233 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 TTC14Q96N46 770 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 RANBP17Q9H2T7 1088 aaKnown RBP13.15□□□□□ -0.3
CCDC163-208ENST00000629670 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
CCDC163-208ENST00000629670 TCP11L1Q9NUJ3 509 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 A0A0C4DFX4 3053 aa13.15□□□□□ -0.3
CCDC163-208ENST00000629670 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 PTPDC1A2A3K4 754 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 B4DLN1 442 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 FOXP2O15409 715 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 SLC16A2P36021 539 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 NOVP48745 357 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 IRX5P78411 483 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 FAM126BQ8IXS8 530 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 PPP1R12CQ9BZL4 782 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 TTYH1Q9H313 450 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 RWDD1Q9H446 243 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
CCDC163-208ENST00000629670 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
CCDC163-208ENST00000629670 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 CTAGE5O15320 804 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 CSF2RAP15509 400 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 SMPD1P17405 629 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 DNAJB2P25686 324 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 NT5C2P49902 561 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-208ENST00000629670 BAATQ14032 418 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-208ENST00000629670 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 AKNAD1Q5T1N1 836 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 TTBK2Q6IQ55 1244 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 FBXO16Q8IX29 292 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-208ENST00000629670 ESR2Q92731 530 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-208ENST00000629670 POLR3EQ9NVU0 708 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-208ENST00000629670 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
CCDC163-208ENST00000629670 CD4P01730 458 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 FGBP02675 491 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 CALML3P27482 149 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 CPT1AP50416 773 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 HAND2P61296 217 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 DUSP28Q4G0W2 176 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 TAPT1Q6NXT6 567 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
CCDC163-208ENST00000629670 SLC43A3Q8NBI5 491 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 WDR11Q9BZH6 1224 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
CCDC163-208ENST00000629670 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms