RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 AK9Q5TCS8 1911 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 ZMYM6O95789 1325 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 USP17L10C9JJH3 530 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 FGRP09769 529 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 PSMC4P43686 418 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 HERVK_113P62684 666 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 NMIQ13287 307 aaPredicted RBP9.15□□□□□ -0.94
TCF4-260ENST00000627685 PABPC4Q13310 644 aaKnown RBP eCLIP9.15□□□□□ -0.94
TCF4-260ENST00000627685 B4GALNT3Q6L9W6 998 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 RASGRP2Q7LDG7 609 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 TRIM46Q7Z4K8 759 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 NBPF11Q86T75 865 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 SKAP1Q86WV1 359 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 IFNL3Q8IZI9 196 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 REPS2Q8NFH8 660 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 SH3TC2Q8TF17 1288 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 INCENPQ9NQS7 918 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 BTBD7Q9P203 1132 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
TCF4-260ENST00000627685 TMX2Q9Y320 296 aa9.15□□□□□ -0.94
TCF4-260ENST00000627685 ZBBXA8MT70 800 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 C19orf81C9J6K1 198 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 ERC2O15083 957 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
TCF4-260ENST00000627685 GCLCP48506 637 aaPredicted RBP9.14□□□□□ -0.95
TCF4-260ENST00000627685 MTFR1Q15390 333 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 ZYXQ15942 572 aaKnown RBP9.14□□□□□ -0.95
TCF4-260ENST00000627685 CATSPERGQ6ZRH7 1159 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 TMEM179Q6ZVK1 233 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 EVI5LQ96CN4 794 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 FSD1Q9BTV5 496 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 ANAPC4Q9UJX5 808 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 ADAMTS5Q9UNA0 930 aa9.14□□□□□ -0.95
TCF4-260ENST00000627685 MYPNQ86TC9 1320 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 EEF2P13639 858 aaKnown RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 FLT3LGP49771 235 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 FCGRTP55899 365 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 ICA1Q05084 483 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 IRF5Q13568 498 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 RAB3GAP1Q15042 981 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 ALX1Q15699 326 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 SLC9C1Q4G0N8 1177 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 TBC1D10CQ8IV04 446 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 ZNF775Q96BV0 537 aaPredicted RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 RPAP3Q9H6T3 665 aaPredicted RBP9.13□□□□□ -0.95
TCF4-260ENST00000627685 VCPKMTQ9H867 229 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 IL17RBQ9NRM6 502 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 FBXO28Q9NVF7 368 aa9.13□□□□□ -0.95
TCF4-260ENST00000627685 PRDM1O75626 825 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 CAPN2P17655 700 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 SDSP20132 328 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 RAB15P59190 212 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 ERVK-24P63145 666 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 PPARAQ07869 468 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 COL9A3Q14050 684 aaPredicted RBP9.12□□□□□ -0.95
TCF4-260ENST00000627685 MAP3K21Q5TCX8 1036 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 MRPL14Q6P1L8 145 aaKnown RBP9.12□□□□□ -0.95
TCF4-260ENST00000627685 TICAM2Q86XR7 235 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 SMCR8Q8TEV9 937 aaPredicted RBP9.12□□□□□ -0.95
TCF4-260ENST00000627685 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
TCF4-260ENST00000627685 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 CEP95Q96GE4 821 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 CCDC17Q96LX7 622 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 TAF6LQ9Y6J9 622 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 PDE4DIPQ5VU43 2346 aa9.12□□□□□ -0.95
TCF4-260ENST00000627685 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 KIAA0100Q14667 2235 aaKnown RBP9.11□□□□□ -0.95
TCF4-260ENST00000627685 FGAP02671 866 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 HSPD1P10809 573 aaKnown RBP9.11□□□□□ -0.95
TCF4-260ENST00000627685 ELNP15502 786 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 GNAT2P19087 354 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 GRK4P32298 578 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 NBPF20Q3BBV1 942 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 PPP1R26Q5T8A7 1209 aaPredicted RBP9.11□□□□□ -0.95
TCF4-260ENST00000627685 TTC22Q5TAA0 569 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 TRIB2Q92519 343 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 ATG4CQ96DT6 458 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 NUP88Q99567 741 aaPredicted RBP9.11□□□□□ -0.95
TCF4-260ENST00000627685 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 TMOD4Q9NZQ9 345 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 ZNF214Q9UL59 606 aaPredicted RBP9.11□□□□□ -0.95
TCF4-260ENST00000627685 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 MYH8P13535 1937 aa9.11□□□□□ -0.95
TCF4-260ENST00000627685 NEDD4P46934 1319 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 MINDY4BA8MYZ0 360 aa9.1□□□□□ -0.95
TCF4-260ENST00000627685 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms