RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 ARHGAP29Q52LW3 1261 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 RNF26Q9BY78 433 aaPredicted RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATRX-213ENST00000624032 ARHGEF10LQ9HCE6 1279 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 ARGLU1Q9NWB6 273 aaPredicted RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 ZNF112Q9UJU3 913 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 KCNJ14Q9UNX9 436 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 ME1P48163 572 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 TULP2O00295 520 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 TRAF5O00463 557 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 DEXIO95424 95 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 SLC1A4P43007 532 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 SLC20A2Q08357 652 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 ZRSR1Q15695 479 aaKnown RBP13.11□□□□□ -0.31
ATRX-213ENST00000624032 VPS54Q9P1Q0 977 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 SMC2O95347 1197 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 GNAQP50148 359 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 KRT40Q6A162 431 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 TMC6Q7Z403 805 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 HOMER1Q86YM7 354 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 FBXO18Q8NFZ0 1043 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
ATRX-213ENST00000624032 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 TMCO3Q6UWJ1 677 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 LRRN4CLQ8ND94 238 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 XPO4Q9C0E2 1151 aaKnown RBP13.11□□□□□ -0.31
ATRX-213ENST00000624032 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
ATRX-213ENST00000624032 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 UBXN4Q92575 508 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 PIGSQ96S52 555 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 CCP110O43303 1012 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 SNAP25P60880 206 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 TSPYL1Q9H0U9 437 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.1□□□□□ -0.31
ATRX-213ENST00000624032 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
ATRX-213ENST00000624032 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 PTPRAP18433 802 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 HNRNPH2P55795 449 aaKnown RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 ETF1P62495 437 aaKnown RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 TPM4P67936 248 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-213ENST00000624032 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 MRPS27Q92552 414 aaKnown RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 DOCK1Q14185 1865 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 USP17L10C9JJH3 530 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 ZRANB2O95218 330 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATRX-213ENST00000624032 SCG2P13521 617 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 SPP2Q13103 211 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 ADGRF4Q8IZF3 695 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 FMR1NBQ8N0W7 255 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 WASF1Q92558 559 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 ZHX2Q9Y6X8 837 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 PHLPP2Q6ZVD8 1323 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 VGLL4Q14135 290 aa13.09□□□□□ -0.31
ATRX-213ENST00000624032 PFKFB3Q16875 520 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
ATRX-213ENST00000624032 TRIM75PA6NK02 468 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 BMP3P12645 472 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 MTMR2Q13614 643 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 TRIM29Q14134 588 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 MNS1Q8NEH6 495 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
ATRX-213ENST00000624032 RIOX1Q9H6W3 641 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 VCPKMTQ9H867 229 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 GOPCQ9HD26 462 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
ATRX-213ENST00000624032 CAPN2P17655 700 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
ATRX-213ENST00000624032 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
ATRX-213ENST00000624032 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms