RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 TLR3O15455 904 aaKnown RBP28.15■■■□□ 2.1
CPSF1-214ENST00000622776 TMEM240Q5SV17 173 aa28.15■■■□□ 2.1
CPSF1-214ENST00000622776 RASGRP2Q7LDG7 609 aa28.15■■■□□ 2.1
CPSF1-214ENST00000622776 ANAPC4Q9UJX5 808 aa28.15■■■□□ 2.1
CPSF1-214ENST00000622776 GNEQ9Y223 722 aaKnown RBP28.15■■■□□ 2.1
CPSF1-214ENST00000622776 VCANP13611 3396 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 RANBP6O60518 1105 aaKnown RBP28.14■■■□□ 2.1
CPSF1-214ENST00000622776 CSF2RAP15509 400 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 GRIN2CQ14957 1233 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 MUM1L1Q5H9M0 696 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 VPS53Q5VIR6 699 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 CXCL17Q6UXB2 119 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 TMEM199Q8N511 208 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 PPP1R12CQ9BZL4 782 aa28.14■■■□□ 2.1
CPSF1-214ENST00000622776 DDX49Q9Y6V7 483 aaKnown RBP28.14■■■□□ 2.1
CPSF1-214ENST00000622776 TLK2Q86UE8 772 aa28.13■■■□□ 2.09
CPSF1-214ENST00000622776 CYP39A1Q9NYL5 469 aa28.13■■■□□ 2.09
CPSF1-214ENST00000622776 MTMR7Q9Y216 660 aa28.13■■■□□ 2.09
CPSF1-214ENST00000622776 ORC4O43929 436 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 CABYRO75952 493 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 CD4P01730 458 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 NOVP48745 357 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 FSCN1Q16658 493 aaKnown RBP28.12■■■□□ 2.09
CPSF1-214ENST00000622776 SLC43A3Q8NBI5 491 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 TIFAQ96CG3 184 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 EVI5LQ96CN4 794 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 AP5M1Q9H0R1 490 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 ZBTB47Q9UFB7 747 aaPredicted RBP28.12■■■□□ 2.09
CPSF1-214ENST00000622776 CCPG1Q9ULG6 757 aa28.12■■■□□ 2.09
CPSF1-214ENST00000622776 DYNC1LI2O43237 492 aaPredicted RBP28.11■■■□□ 2.09
CPSF1-214ENST00000622776 ACRP10323 421 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 SMPD1P17405 629 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 ALX1Q15699 326 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 CCDC96Q2M329 555 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 ANKRD45Q5TZF3 282 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 RASIP1Q5U651 963 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 IQSEC1Q6DN90 963 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 NSMFQ6X4W1 530 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 EEPD1Q7L9B9 569 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 ZNF576Q9H609 170 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 PDGFCQ9NRA1 345 aa28.11■■■□□ 2.09
CPSF1-214ENST00000622776 FGRP09769 529 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 PTGS1P23219 599 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 CYP2C18P33260 490 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 TAPT1Q6NXT6 567 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 PSRC1Q6PGN9 363 aaPredicted RBP28.1■■■□□ 2.09
CPSF1-214ENST00000622776 ZNF365Q70YC5 407 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 DCAF4Q8WV16 495 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 HELLSQ9NRZ9 838 aa28.1■■■□□ 2.09
CPSF1-214ENST00000622776 ICAM1P05362 532 aa28.09■■■□□ 2.09
CPSF1-214ENST00000622776 ITGA7Q13683 1181 aa28.09■■■□□ 2.09
CPSF1-214ENST00000622776 FBXO16Q8IX29 292 aaPredicted RBP28.09■■■□□ 2.09
CPSF1-214ENST00000622776 GRXCR1A8MXD5 290 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 ZEB2O60315 1214 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 TTBK2Q6IQ55 1244 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 MORC4Q8TE76 937 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 PURBQ96QR8 312 aaKnown RBP28.08■■■□□ 2.09
CPSF1-214ENST00000622776 RANBP17Q9H2T7 1088 aaKnown RBP28.08■■■□□ 2.09
CPSF1-214ENST00000622776 VTA1Q9NP79 307 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 TOMM22Q9NS69 142 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 Q9Y3F1 56 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 GRIN2DO15399 1336 aa28.08■■■□□ 2.09
CPSF1-214ENST00000622776 SLC16A2P36021 539 aa28.07■■■□□ 2.08
CPSF1-214ENST00000622776 BTNL9Q6UXG8 535 aa28.07■■■□□ 2.08
CPSF1-214ENST00000622776 SEZ6LQ9BYH1 1024 aa28.07■■■□□ 2.08
CPSF1-214ENST00000622776 PBX4Q9BYU1 374 aa28.07■■■□□ 2.08
CPSF1-214ENST00000622776 IL23AQ9NPF7 189 aa28.07■■■□□ 2.08
CPSF1-214ENST00000622776 FGAP02671 866 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 TOP1P11387 765 aaKnown RBP28.06■■■□□ 2.08
CPSF1-214ENST00000622776 PBX2P40425 430 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 PDE1AP54750 535 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 TMEM63BQ5T3F8 832 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 SYDE2Q5VT97 1194 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 KIAA1211Q6ZU35 1233 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 HIPK3Q9H422 1215 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 LRRC37A2A6NM11 1700 aa28.06■■■□□ 2.08
CPSF1-214ENST00000622776 BAATQ14032 418 aaPredicted RBP28.05■■■□□ 2.08
CPSF1-214ENST00000622776 RRP12Q5JTH9 1297 aaKnown RBP28.05■■■□□ 2.08
CPSF1-214ENST00000622776 HERVK_113Q902F9 699 aa28.05■■■□□ 2.08
CPSF1-214ENST00000622776 FAM227BQ96M60 508 aa28.05■■■□□ 2.08
CPSF1-214ENST00000622776 TMEM47Q9BQJ4 181 aa28.05■■■□□ 2.08
CPSF1-214ENST00000622776 ADD3Q9UEY8 706 aaKnown RBP28.05■■■□□ 2.08
CPSF1-214ENST00000622776 LCTP09848 1927 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 UMODL1Q5DID0 1318 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 RRP1P56182 461 aaKnown RBP28.04■■■□□ 2.08
CPSF1-214ENST00000622776 MCMDC2Q4G0Z9 681 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 USP38Q8NB14 1042 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 TRPV6Q9H1D0 765 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 GPCPD1Q9NPB8 672 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 TCP11L1Q9NUJ3 509 aa28.04■■■□□ 2.08
CPSF1-214ENST00000622776 FRMPD2Q68DX3 1309 aaPredicted RBP28.03■■■□□ 2.08
CPSF1-214ENST00000622776 A0A0D9SFI3 127 aa28.03■■■□□ 2.08
CPSF1-214ENST00000622776 NFIBO00712 420 aa28.03■■■□□ 2.08
CPSF1-214ENST00000622776 FGBP02675 491 aa28.03■■■□□ 2.08
CPSF1-214ENST00000622776 PSMC6P62333 389 aa28.03■■■□□ 2.08
CPSF1-214ENST00000622776 B4GALT4O60513 344 aa28.02■■■□□ 2.08
CPSF1-214ENST00000622776 ALDH5A1P51649 535 aaPredicted RBP28.02■■■□□ 2.08
CPSF1-214ENST00000622776 DUSP28Q4G0W2 176 aa28.02■■■□□ 2.08
CPSF1-214ENST00000622776 NOC4LQ9BVI4 516 aaKnown RBP28.02■■■□□ 2.08
CPSF1-214ENST00000622776 MTIF3Q9H2K0 278 aaKnown RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms