RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CCDC102AQ96A19 550 aa20.43■□□□□ 0.86
PTCHD3-202ENST00000622555 PNMA2Q9UL42 364 aa20.43■□□□□ 0.86
PTCHD3-202ENST00000622555 MRPL12P52815 198 aaKnown RBP20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 PAXIP1Q6ZW49 1069 aaPredicted RBP20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 ANKRD23Q86SG2 305 aa20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 HHIPL1Q96JK4 782 aa20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 PNMA3Q9UL41 463 aa20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 MRPL11Q9Y3B7 192 aaKnown RBP20.42■□□□□ 0.86
PTCHD3-202ENST00000622555 MANSC4A6NHS7 340 aaPredicted RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 PDHXO00330 501 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 ALAS1P13196 640 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 OAZ1P54368 228 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 HERVK_113P62684 666 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 DNM1Q05193 864 aaKnown RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 TMEM132BQ14DG7 1078 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 MB21D1Q8N884 522 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 TNFRSF25Q93038 417 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 GBP4Q96PP9 640 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 GLT8D2Q9H1C3 349 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 PCDHA6Q9UN73 950 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 SLC45A1Q9Y2W3 748 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 PCDHA8Q9Y5H6 950 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 M0R2N6 131 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 BAG4O95429 457 aaKnown RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 PLS1Q14651 629 aa20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 BIN2Q9UBW5 565 aaPredicted RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 ZNF214Q9UL59 606 aaPredicted RBP20.41■□□□□ 0.86
PTCHD3-202ENST00000622555 RBBP6Q7Z6E9 1792 aaKnown RBP20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 FAM155AB1AL88 458 aaPredicted RBP20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 ATP2A1O14983 1001 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 APLP1P51693 650 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 UBE2SQ16763 222 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 MYSM1Q5VVJ2 828 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 LBX2Q6XYB7 198 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 PIK3AP1Q6ZUJ8 805 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 TEX13BQ9BXU2 312 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 HOMER2Q9NSB8 354 aa20.4■□□□□ 0.86
PTCHD3-202ENST00000622555 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 TESPA1A2RU30 521 aaPredicted RBP20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 FAM205CA6NFA0 338 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 OPLAHO14841 1288 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 GRM1Q13255 1194 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 EARS2Q5JPH6 523 aaKnown RBP20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 JAKMIP3Q5VZ66 844 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 POTEEQ6S8J3 1075 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 CLEC17AQ6ZS10 378 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 ZNF396Q96N95 335 aaPredicted RBP20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 PTPN18Q99952 460 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 CREBZFQ9NS37 354 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 TMEM260Q9NX78 707 aa20.39■□□□□ 0.86
PTCHD3-202ENST00000622555 CYP2C8P10632 490 aa20.39■□□□□ 0.85
PTCHD3-202ENST00000622555 STAT3P40763 770 aa20.39■□□□□ 0.85
PTCHD3-202ENST00000622555 USP17L6PQ6QN14 398 aa20.39■□□□□ 0.85
PTCHD3-202ENST00000622555 KRT25Q7Z3Z0 450 aa20.39■□□□□ 0.85
PTCHD3-202ENST00000622555 BTBD7Q9P203 1132 aa20.39■□□□□ 0.85
PTCHD3-202ENST00000622555 KRT85P78386 507 aa20.38■□□□□ 0.85
PTCHD3-202ENST00000622555 SMCR8Q8TEV9 937 aaPredicted RBP20.38■□□□□ 0.85
PTCHD3-202ENST00000622555 TRERF1Q96PN7 1200 aa20.38■□□□□ 0.85
PTCHD3-202ENST00000622555 TFIP11Q9UBB9 837 aaKnown RBP20.38■□□□□ 0.85
PTCHD3-202ENST00000622555 CNPY2Q9Y2B0 182 aa20.38■□□□□ 0.85
PTCHD3-202ENST00000622555 MEIS2O14770 477 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 PEX10O60683 326 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 CFBP00751 764 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 CLK2P49760 499 aaKnown RBP20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 MUM1L1Q5H9M0 696 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 CYP4F22Q6NT55 531 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 GTF3C2Q8WUA4 911 aaPredicted RBP20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 CLEC4DQ8WXI8 215 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 RNF146Q9NTX7 359 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 NOL7Q9UMY1 257 aaKnown RBP20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
PTCHD3-202ENST00000622555 GCOM1H8Y6P7 765 aaPredicted RBP20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 NFIBO00712 420 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 POLR2MP0CAP2 368 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 HOXA13P31271 388 aaPredicted RBP20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 NONOQ15233 471 aaKnown RBP eCLIP20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 TKFCQ3LXA3 575 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 RILPL1Q5EBL4 403 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 ATL3Q6DD88 541 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 MCF2L2Q86YR7 1114 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 PARK7Q99497 189 aaKnown RBP20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 RABGAP1Q9Y3P9 1069 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 MYH7BA7E2Y1 1941 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 CNMDO75829 334 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 ATP2B1P20020 1258 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 INHBEP58166 350 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 CEBPZQ03701 1054 aaKnown RBP20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 SREBF2Q12772 1141 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 DEFB115Q30KQ5 88 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 TBC1D5Q92609 795 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 PGBD1Q96JS3 809 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 USP28Q96RU2 1077 aa20.36■□□□□ 0.85
PTCHD3-202ENST00000622555 FTOQ9C0B1 505 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms