RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 MEA1Q16626 185 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 PTF1AQ7RTS3 328 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 FAM114A1Q8IWE2 563 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCDC24Q8N4L8 307 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 CERKQ8TCT0 537 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 LRRC15Q8TF66 581 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 P2RX5Q93086 422 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 IQCDQ96DY2 449 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 RRP36Q96EU6 259 aaKnown RBP10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 HAUS4Q9H6D7 363 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 ANKZF1Q9H8Y5 726 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 ST7Q9NRC1 585 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 ANKIB1Q9P2G1 1089 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 MAGEC2Q9UBF1 373 aaPredicted RBP10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 CCNL1Q9UK58 526 aaPredicted RBP10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 JAG2Q9Y219 1238 aa10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 LUC7L2Q9Y383 392 aaKnown RBP10.79□□□□□ -0.68
IGHV3-54-201ENST00000622166 PLIN4Q96Q06 1357 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 C10orf71Q711Q0 1435 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 A0A1W2PQJ5 194 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 SMCO2A6NFE2 343 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 PSMD14O00487 310 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 PLCG1P19174 1290 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 CYP2C19P33261 490 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 BTDP43251 543 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 NAPAP54920 295 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 CDK17Q00537 523 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 AMPD3Q01432 767 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 NFIXQ14938 502 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 LONRF2Q1L5Z9 754 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 FIGNQ5HY92 759 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 WDR59Q6PJI9 974 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 NEK8Q86SG6 692 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 SLC44A5Q8NCS7 719 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 EYA3Q99504 573 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 CHP1Q99653 195 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 SLF1Q9BQI6 1058 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 TRIM9Q9C026 710 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 TTYH3Q9C0H2 523 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 CD209Q9NNX6 404 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 EXOC1Q9NV70 894 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 MAPK8IP1Q9UQF2 711 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 GAKO14976 1311 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 LRRC37AA6NMS7 1700 aa10.78□□□□□ -0.68
IGHV3-54-201ENST00000622166 CTAGE15A4D2H0 777 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 RASSF10A6NK89 507 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 ERLIN1O75477 346 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 ABL1P00519 1130 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 CTAGE8P0CG41 777 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 RHBDL3P58872 404 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 HERVK_113P62684 666 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 KRT83P78385 493 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 GPSM2P81274 684 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 ZBED6P86452 979 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 PDE4DQ08499 809 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TXNRD1Q16881 649 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TSR1Q2NL82 804 aaKnown RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 BEND6Q5SZJ8 279 aaPredicted RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 SOGA3Q5TF21 947 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 FOXR2Q6PJQ5 311 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TRAPPC11Q7Z392 1133 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 CTAGE6Q86UF2 777 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 CTAGE4Q8IX94 777 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TEX11Q8IYF3 940 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 CCDC170Q8IYT3 715 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 RASSF8Q8NHQ8 419 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 ERGIC2Q96RQ1 377 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 TUBGCP2Q9BSJ2 902 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 MMTAG2Q9BU76 263 aaKnown RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 GBP3Q9H0R5 595 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 STK17AQ9UEE5 414 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 SAP30BPQ9UHR5 308 aaKnown RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 PUF60Q9UHX1 559 aaKnown RBP10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 MYO6Q9UM54 1294 aa10.77□□□□□ -0.69
IGHV3-54-201ENST00000622166 PVALEFA0A1B0GWK0 134 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CCDC66A2RUB6 948 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 EIF3CLB5ME19 914 aaKnown RBP10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 ADRA2BP18089 450 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 OAS2P29728 719 aaKnown RBP10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 RFC4P35249 363 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CYLC1P35663 651 aaPredicted RBP10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 SLC4A8Q2Y0W8 1093 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CRY2Q49AN0 593 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 PAPD7Q5XG87 772 aaKnown RBP10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 ANKRD40Q6AI12 368 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CENPPQ6IPU0 288 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
IGHV3-54-201ENST00000622166 CNBD1Q8NA66 436 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms