RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LGR4Q9BXB1 951 aa7.25□□□□□ -1.25
BRCA1-229ENST00000621897 SMG5Q9UPR3 1016 aaKnown RBP7.25□□□□□ -1.25
BRCA1-229ENST00000621897 TEX51A0A1B0GUA7 166 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 ANKRD34BA5PLL1 514 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 TCAF2A6NFQ2 919 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 SEMA7AO75326 666 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 VIPR1P32241 457 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 YBX1P67809 324 aaKnown RBP7.24□□□□□ -1.25
BRCA1-229ENST00000621897 RCSD1Q6JBY9 416 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 C6orf15Q6UXA7 325 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-229ENST00000621897 MCF2L2Q86YR7 1114 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 JAMLQ86YT9 394 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-229ENST00000621897 KLHL14Q9P2G3 628 aa7.24□□□□□ -1.25
BRCA1-229ENST00000621897 MBD1Q9UIS9 605 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-229ENST00000621897 ARL4AP40617 200 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 SRSF3P84103 164 aaKnown RBP7.23□□□□□ -1.25
BRCA1-229ENST00000621897 AMPD2Q01433 879 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 LAPTM5Q13571 262 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 LARP1BQ659C4 914 aaKnown RBP7.23□□□□□ -1.25
BRCA1-229ENST00000621897 TMEM132EQ6IEE7 984 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 LRRC56Q8IYG6 542 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-229ENST00000621897 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 TOX2Q96NM4 488 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 ZNF408Q9H9D4 720 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 ACTR10Q9NZ32 417 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 PRKAG3Q9UGI9 489 aa7.23□□□□□ -1.25
BRCA1-229ENST00000621897 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 HRKO00198 91 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 KCNH1O95259 989 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 EPHB3P54753 998 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 LINC00310P59036 64 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 ARID5AQ03989 594 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 GRB10Q13322 594 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 GNL2Q13823 731 aaKnown RBP7.22□□□□□ -1.25
BRCA1-229ENST00000621897 EEF1DP3Q658K8 133 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 SPOCD1Q6ZMY3 1216 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 APBA2Q99767 749 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 CNTD2Q9H8S5 307 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 AKT3Q9Y243 479 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 EMC9Q9Y3B6 208 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 BACE2Q9Y5Z0 518 aa7.22□□□□□ -1.25
BRCA1-229ENST00000621897 C2orf71A6NGG8 1288 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 TBC1D8O95759 1140 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 MPOP05164 745 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 TACR1P25103 407 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 DNAJA1P31689 397 aaKnown RBP7.21□□□□□ -1.26
BRCA1-229ENST00000621897 NCAPHQ15003 741 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 TNNI3KQ59H18 835 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 MRM1Q6IN84 353 aaKnown RBP7.21□□□□□ -1.26
BRCA1-229ENST00000621897 RPTNQ6XPR3 784 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 LCNL1Q6ZST4 164 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 FAM178BQ8IXR5 827 aa7.21□□□□□ -1.26
BRCA1-229ENST00000621897 A0A1W2PQ27 194 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 A0A1W2PQ64 194 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 A0A1W2PQC6 194 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 A0A1W2PQD8 194 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 L1CAMP32004 1257 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 SEPHS1P49903 392 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 CPNE8Q86YQ8 564 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 BVESQ8NE79 360 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 PPP1R14AQ96A00 147 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 SIRT5Q9NXA8 310 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 FBLN5Q9UBX5 448 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
BRCA1-229ENST00000621897 TBX1O43435 398 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 DBHP09172 617 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 CDR1P51861 262 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 ZNF143P52747 638 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-229ENST00000621897 CYP4F3Q08477 520 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 SSPNQ14714 243 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 PLEKHN1Q494U1 663 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-229ENST00000621897 TMC6Q7Z403 805 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 TRIM59Q8IWR1 403 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 MRGPRX3Q96LB0 322 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 PDLIM7Q9NR12 457 aa7.19□□□□□ -1.26
BRCA1-229ENST00000621897 ABLIM1O14639 778 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 PPP1R11O60927 126 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-229ENST00000621897 DDAH1O94760 285 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 NAT2P11245 290 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 CORO7P57737 925 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 SCRN1Q12765 414 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 CBX2Q14781 532 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-229ENST00000621897 SLC43A3Q8NBI5 491 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 ZSCAN18Q8TBC5 510 aaPredicted RBP7.18□□□□□ -1.26
BRCA1-229ENST00000621897 HNRNPLLQ8WVV9 542 aaKnown RBP7.18□□□□□ -1.26
BRCA1-229ENST00000621897 COPS5Q92905 334 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 GPRC5CQ9NQ84 441 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
BRCA1-229ENST00000621897 E9PSI1 815 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 SUSD5O60279 629 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 ZSCAN22P10073 491 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-229ENST00000621897 MBLAC2Q68D91 279 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 BICRALQ6AI39 1079 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 CIAPIN1Q6FI81 312 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 POMZP3Q6PJE2 187 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
BRCA1-229ENST00000621897 NLGN2Q8NFZ4 835 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms