RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 YEATS4O95619 227 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 ICAM1P05362 532 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 TRAF1Q13077 416 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 UBE2SQ16763 222 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 CATSPERGQ6ZRH7 1159 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 KRT25Q7Z3Z0 450 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 PROCA1Q8NCQ7 364 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-212ENST00000621783 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 SLC38A10Q9HBR0 1119 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 CCPG1Q9ULG6 757 aa12.2□□□□□ -0.46
CPNE3-212ENST00000621783 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
CPNE3-212ENST00000621783 ABCB11O95342 1321 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-212ENST00000621783 WNT7AO00755 349 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 KIF3CO14782 793 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 OPLAHO14841 1288 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 FDX1P10109 184 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
CPNE3-212ENST00000621783 MRPL12P52815 198 aaKnown RBP12.19□□□□□ -0.46
CPNE3-212ENST00000621783 MOGSQ13724 837 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 STK38Q15208 465 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 SF3A1Q15459 793 aaKnown RBP12.19□□□□□ -0.46
CPNE3-212ENST00000621783 TTC38Q5R3I4 469 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 CST9Q5W186 159 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 REPS2Q8NFH8 660 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 GLT8D2Q9H1C3 349 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 PSTPIP2Q9H939 334 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 BIN2Q9UBW5 565 aaPredicted RBP12.19□□□□□ -0.46
CPNE3-212ENST00000621783 RCOR1Q9UKL0 485 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 AGTPBP1Q9UPW5 1226 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 PCDHB6Q9Y5E3 794 aa12.19□□□□□ -0.46
CPNE3-212ENST00000621783 VWA5AO00534 786 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 TRAK2O60296 914 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 ZBED4O75132 1171 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 UBE2HP62256 183 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 COG2Q14746 738 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPNE3-212ENST00000621783 PTPAQ15257 358 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 INF2Q27J81 1249 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 KCNG4Q8TDN1 519 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 RAVER2Q9HCJ3 691 aaKnown RBP12.18□□□□□ -0.46
CPNE3-212ENST00000621783 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.18□□□□□ -0.46
CPNE3-212ENST00000621783 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
CPNE3-212ENST00000621783 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
CPNE3-212ENST00000621783 CTDP1Q9Y5B0 961 aaPredicted RBP12.18□□□□□ -0.46
CPNE3-212ENST00000621783 MEIS2O14770 477 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 SPTLC2O15270 562 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-212ENST00000621783 AP3B2Q13367 1082 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 SLC39A14Q15043 492 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 USP17L6PQ6QN14 398 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
CPNE3-212ENST00000621783 GPT2Q8TD30 523 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
CPNE3-212ENST00000621783 PIK3CDO00329 1044 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 PPP6R2O75170 966 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 MBD3O95983 291 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 ALAS1P13196 640 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 ME1P48163 572 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 OAZ1P54368 228 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 HUNKP57058 714 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 IRX3P78415 501 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-212ENST00000621783 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
CPNE3-212ENST00000621783 ZNF174Q15697 407 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 SKOR2Q2VWA4 1001 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-212ENST00000621783 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 GPAT2Q6NUI2 795 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 SMC1BQ8NDV3 1235 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 CLEC4DQ8WXI8 215 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 ZNF214Q9UL59 606 aaPredicted RBP12.16□□□□□ -0.46
CPNE3-212ENST00000621783 CEP131Q9UPN4 1083 aa12.16□□□□□ -0.46
CPNE3-212ENST00000621783 DDX49Q9Y6V7 483 aaKnown RBP12.16□□□□□ -0.46
CPNE3-212ENST00000621783 NFIBO00712 420 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 ATP2A1O14983 1001 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 BMP15O95972 392 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 CETPP11597 493 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 MCM7P33993 719 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 GTF2A2P52657 109 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPNE3-212ENST00000621783 TMEM132BQ14DG7 1078 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 KLHL40Q2TBA0 621 aa12.15□□□□□ -0.46
CPNE3-212ENST00000621783 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms