RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 GOLGA1Q92805 767 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 ARHGEF1Q92888 912 aaKnown RBP3.64□□□□□ -1.83
U1.39-201ENST00000621562 PNMA5Q96PV4 448 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 MTMR9Q96QG7 549 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 ERGIC2Q96RQ1 377 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 CHP1Q99653 195 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 C7orf25Q9BPX7 421 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 SLF1Q9BQI6 1058 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 PYM1Q9BRP8 204 aaKnown RBP3.64□□□□□ -1.83
U1.39-201ENST00000621562 PARD6BQ9BYG5 372 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 TRIM9Q9C026 710 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 ZMYND12Q9H0C1 365 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 VPS16Q9H269 839 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 CPVLQ9H3G5 476 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 CUEDC2Q9H467 287 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 RIOX1Q9H6W3 641 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 MAGEF1Q9HAY2 307 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 BLOC1S4Q9NUP1 217 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 MCM9Q9NXL9 1143 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 MYO1AQ9UBC5 1043 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 TRIM10Q9UDY6 481 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 SIK3Q9Y2K2 1263 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 LEMD3Q9Y2U8 911 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 A0A0G2JMZ2 1700 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 LRRC37A2A6NM11 1700 aa3.64□□□□□ -1.83
U1.39-201ENST00000621562 MCM3APO60318 1980 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 A0A0G2JS52 829 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 A0A1W2PQJ5 194 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 KLRG2A4D1S0 409 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 TSPY2A6NKD2 308 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 H7C1D1 291 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 PSMD14O00487 310 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 N4BP3O15049 544 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 EPHB6O15197 1021 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 GNPATO15228 680 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 SLC37A4O43826 429 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 PPP1R11O60927 126 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 NDUFA10O95299 355 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 LCA5LO95447 670 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 LDHBP07195 334 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 TPM1P09493 284 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 OR52Z1P0C646 297 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 FCER1AP12319 257 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 GTF2E1P29083 439 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 OAS2P29728 719 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 HNRNPH3P31942 346 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 KRT9P35527 623 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 BTDP43251 543 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 CLK2P49760 499 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 KLK7P49862 253 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 GNAQP50148 359 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 CHMP4BP1P59074 171 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 VSNL1P62760 191 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ST5P78524 1137 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 CDK17Q00537 523 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 DDR1Q08345 913 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 STK4Q13043 487 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 TUBB2AQ13885 445 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 BRD3Q15059 726 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 TXNRD1Q16881 649 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 WHAMMP3Q1A5X7 153 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 LONRF2Q1L5Z9 754 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 FILIP1LQ4L180 1135 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZCWPW2Q504Y3 356 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 FIGNQ5HY92 759 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZNF569Q5MCW4 686 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 JAKMIP3Q5VZ66 844 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 PAPD7Q5XG87 772 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 TMCO3Q6UWJ1 677 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZNF572Q7Z3I7 529 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 KRT25Q7Z3Z0 450 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 KCNK18Q7Z418 384 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 HEATR3Q7Z4Q2 680 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZNF804AQ7Z570 1209 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 CABP7Q86V35 215 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 DZIP1Q86YF9 867 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 POTEDQ86YR6 584 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 MAPKAPK5Q8IW41 473 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ZC3H3Q8IXZ2 948 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 FNBP4Q8N3X1 1017 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 NOC3LQ8WTT2 800 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 TGFBRAP1Q8WUH2 860 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 CPLX3Q8WVH0 158 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 HNRNPLLQ8WVV9 542 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 P2RX5Q93086 422 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 MTMR8Q96EF0 704 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 FAM163AQ96GL9 167 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 CNOT6LQ96LI5 555 aaKnown RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 AK8Q96MA6 479 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 NLRP3Q96P20 1036 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 SETDB2Q96T68 719 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 NAPGQ99747 312 aaPredicted RBP3.63□□□□□ -1.83
U1.39-201ENST00000621562 LZTS2Q9BRK4 669 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 TUBB2BQ9BVA1 445 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 SEMA6BQ9H3T3 888 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 KAT14Q9H8E8 782 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 LZTFL1Q9NQ48 299 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 LRRC4BQ9NT99 713 aa3.63□□□□□ -1.83
U1.39-201ENST00000621562 ARGLU1Q9NWB6 273 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms