RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CNOT6Q9ULM6 557 aaKnown RBP8.31□□□□□ -1.08
VPS29-212ENST00000621131 INPP5FQ9Y2H2 1132 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 KCTD3Q9Y597 815 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 ADAMTS20P59510 1910 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 RB1CC1Q8TDY2 1594 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 CD3EP07766 207 aa8.3□□□□□ -1.08
VPS29-212ENST00000621131 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
VPS29-212ENST00000621131 ZNF513Q8N8E2 541 aaPredicted RBP8.3□□□□□ -1.08
VPS29-212ENST00000621131 ADCY4Q8NFM4 1077 aa8.3□□□□□ -1.08
VPS29-212ENST00000621131 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
VPS29-212ENST00000621131 FGD4Q96M96 766 aa8.3□□□□□ -1.08
VPS29-212ENST00000621131 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
VPS29-212ENST00000621131 AURKAO14965 403 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 N4BP3O15049 544 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 VAMP4O75379 141 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 EPHB3P54753 998 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 SSPNQ14714 243 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 ADAT2Q7Z6V5 191 aaKnown RBP8.29□□□□□ -1.08
VPS29-212ENST00000621131 JAMLQ86YT9 394 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 ARHGEF39Q8N4T4 335 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
VPS29-212ENST00000621131 GBP3Q9H0R5 595 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
VPS29-212ENST00000621131 NUDT19A8MXV4 375 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 PPM1BO75688 479 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 TBC1D8O95759 1140 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
VPS29-212ENST00000621131 CDR1P51861 262 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 ZNF385BQ569K4 471 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 PANK1Q8TE04 598 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 SIGLEC10Q96LC7 697 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
VPS29-212ENST00000621131 A0A1W2PQ27 194 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 A0A1W2PQ64 194 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 A0A1W2PQC6 194 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 A0A1W2PQD8 194 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 TMEM62Q0P6H9 643 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 OLFML2BQ68BL8 750 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 KIAA1211LQ6NV74 962 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 RPTNQ6XPR3 784 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 LDHDQ86WU2 507 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 MZB1Q8WU39 189 aa8.27□□□□□ -1.09
VPS29-212ENST00000621131 EPB41L4AQ9HCS5 686 aaPredicted RBP8.27□□□□□ -1.09
VPS29-212ENST00000621131 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
VPS29-212ENST00000621131 IRS4O14654 1257 aaPredicted RBP8.26□□□□□ -1.09
VPS29-212ENST00000621131 NR1I3Q14994 352 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 EEF1DP3Q658K8 133 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 VHLLQ6RSH7 139 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 TMC6Q7Z403 805 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 TMEFF1Q8IYR6 380 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 PDLIM7Q9NR12 457 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 IRAK3Q9Y616 596 aa8.26□□□□□ -1.09
VPS29-212ENST00000621131 DBHP09172 617 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 L1CAMP32004 1257 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 MAPKAPK2P49137 400 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 CORO7P57737 925 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 DPY19L1Q2PZI1 675 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 TTLL10Q6ZVT0 673 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 IGDCC3Q8IVU1 814 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 PCDHA5Q9Y5H7 936 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 IRS2Q9Y4H2 1338 aa8.25□□□□□ -1.09
VPS29-212ENST00000621131 ANKRD34BA5PLL1 514 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 C2orf71A6NGG8 1288 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 SRGAP3O43295 1099 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 PI3P19957 117 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 GRB10Q13322 594 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 PAQR3Q6TCH7 311 aa8.24□□□□□ -1.09
VPS29-212ENST00000621131 DACT3Q96B18 629 aaPredicted RBP8.24□□□□□ -1.09
VPS29-212ENST00000621131 STXBP3O00186 592 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 RFXAPO00287 272 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 PPP1R11O60927 126 aaPredicted RBP8.23□□□□□ -1.09
VPS29-212ENST00000621131 CYBBP04839 570 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 ERCC5P28715 1186 aaPredicted RBP8.23□□□□□ -1.09
VPS29-212ENST00000621131 AMPD2Q01433 879 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
VPS29-212ENST00000621131 APBA2Q99767 749 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 APEX2Q9UBZ4 518 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
VPS29-212ENST00000621131 KRTAP9-7A8MTY7 169 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 TCERG1LQ5VWI1 586 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 BICRALQ6AI39 1079 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 ZC3H14Q6PJT7 736 aaKnown RBP8.22□□□□□ -1.09
VPS29-212ENST00000621131 AKT3Q9Y243 479 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 EMC9Q9Y3B6 208 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 BACE2Q9Y5Z0 518 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 HCFC2Q9Y5Z7 792 aa8.22□□□□□ -1.09
VPS29-212ENST00000621131 SEPHS1P49903 392 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 ZNF143P52747 638 aaPredicted RBP8.21□□□□□ -1.1
VPS29-212ENST00000621131 NCKAP1LP55160 1127 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 FAM129CQ86XR2 697 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 TMEM151BQ8IW70 566 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 BVESQ8NE79 360 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 RAPGEFL1Q9UHV5 662 aa8.21□□□□□ -1.1
VPS29-212ENST00000621131 CCDC9Q9Y3X0 531 aaKnown RBP8.21□□□□□ -1.1
VPS29-212ENST00000621131 A0A1W2PQJ5 194 aa8.2□□□□□ -1.1
VPS29-212ENST00000621131 SMAD7O15105 426 aaKnown RBP8.2□□□□□ -1.1
VPS29-212ENST00000621131 TACR1P25103 407 aa8.2□□□□□ -1.1
VPS29-212ENST00000621131 NCAPHQ15003 741 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms