RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 KCNJ2P63252 427 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 KRT12Q99456 494 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 PHACTR1Q9C0D0 580 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 LACRTQ9GZZ8 138 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 BLZF1Q9H2G9 400 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 TARSL2A2RTX5 802 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 TACC1O75410 805 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 TRIM37O94972 964 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 MOCS3O95396 460 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 KRT26Q7Z3Y9 468 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 MFN1Q8IWA4 741 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 SNRNP27Q8WVK2 155 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 EDC4Q6P2E9 1401 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 SLC39A6Q13433 755 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 RPGRIP1Q96KN7 1286 aa13.53□□□□□ -0.24
MATR3-227ENST00000618441 CORO1CQ9ULV4 474 aaPredicted RBP13.53□□□□□ -0.24
MATR3-227ENST00000618441 ZNF189O75820 626 aaPredicted RBP13.52□□□□□ -0.24
MATR3-227ENST00000618441 GCP02774 474 aa13.52□□□□□ -0.24
MATR3-227ENST00000618441 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.24
MATR3-227ENST00000618441 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.24
MATR3-227ENST00000618441 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.24
MATR3-227ENST00000618441 RNF220Q5VTB9 566 aa13.52□□□□□ -0.24
MATR3-227ENST00000618441 BICD1Q96G01 975 aa13.52□□□□□ -0.24
MATR3-227ENST00000618441 ARHGEF10LQ9HCE6 1279 aa13.52□□□□□ -0.24
MATR3-227ENST00000618441 CETN3O15182 167 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 MAGOHP61326 146 aaKnown RBP13.52□□□□□ -0.25
MATR3-227ENST00000618441 GRIN1Q05586 938 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 DRP2Q13474 957 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 ANKRD20A3Q5VUR7 823 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 ZNF530Q6P9A1 599 aaPredicted RBP13.52□□□□□ -0.25
MATR3-227ENST00000618441 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 FBF1Q8TES7 1133 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
MATR3-227ENST00000618441 GORASP1Q9BQQ3 440 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 ZMYM6O95789 1325 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 CD163L1Q9NR16 1453 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 STXBP3O00186 592 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
MATR3-227ENST00000618441 KRT83P78385 493 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 TRADDQ15628 312 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 CTAGE1Q96RT6 745 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 SETBP1Q9Y6X0 1596 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 LAMC1P11047 1609 aa13.52□□□□□ -0.25
MATR3-227ENST00000618441 LRRC7Q96NW7 1537 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 RNF8O76064 485 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 FMNL1O95466 1100 aaPredicted RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 HOXC9P31274 260 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 CYLC1P35663 651 aaPredicted RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 RFC5P40937 340 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 CEP128Q6ZU80 1094 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 RAPGEF5Q92565 580 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 LRWD1Q9UFC0 647 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 AKR1B10O60218 316 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 A0A1B0GTH6 734 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 M0R2C6 588 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 ATP2A2P16615 1042 aaKnown RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 NAF1Q96HR8 494 aaKnown RBP13.51□□□□□ -0.25
MATR3-227ENST00000618441 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
MATR3-227ENST00000618441 IGF2BP3O00425 579 aaKnown RBP eCLIP13.5□□□□□ -0.25
MATR3-227ENST00000618441 USO1O60763 962 aaKnown RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 CCDC6Q16204 474 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 KRI1Q8N9T8 703 aaKnown RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 MORC4Q8TE76 937 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 ANKRD24Q8TF21 1146 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 RBM41Q96IZ5 413 aaKnown RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 RBM12Q9NTZ6 932 aaKnown RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 FESP07332 822 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 PLCD1P51178 756 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 KRT40Q6A162 431 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 USP49Q70CQ1 688 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 FAM114A1Q8IWE2 563 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 FGD4Q96M96 766 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
MATR3-227ENST00000618441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
MATR3-227ENST00000618441 TTC26A0AVF1 554 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms