RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 P2RX7Q99572 595 aaKnown RBP16.3■□□□□ 0.2
USP39-220ENST00000613444 GOLPH3LQ9H4A5 285 aa16.3■□□□□ 0.2
USP39-220ENST00000613444 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
USP39-220ENST00000613444 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
USP39-220ENST00000613444 GOLGA6L4A6NEF3 574 aa16.29■□□□□ 0.2
USP39-220ENST00000613444 IRF6O14896 467 aa16.29■□□□□ 0.2
USP39-220ENST00000613444 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
USP39-220ENST00000613444 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.2
USP39-220ENST00000613444 ZNF174Q15697 407 aa16.29■□□□□ 0.2
USP39-220ENST00000613444 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
USP39-220ENST00000613444 FBXO2Q9UK22 296 aaPredicted RBP16.29■□□□□ 0.2
USP39-220ENST00000613444 USP17L15C9J2P7 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L13C9JLJ4 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L11C9JVI0 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L18D6R9N7 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L22D6RA61 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L17D6RBQ6 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L19D6RCP7 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L20D6RJB6 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 PTPREP23469 700 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L24Q0WX57 530 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 C4orf32Q8N8J7 132 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 ADAMTS5Q9UNA0 930 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 TRPM7Q96QT4 1865 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 ICAM1P05362 532 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 ATP2C1P98194 919 aaPredicted RBP16.28■□□□□ 0.2
USP39-220ENST00000613444 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
USP39-220ENST00000613444 CATSPERGQ6ZRH7 1159 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
USP39-220ENST00000613444 JMYQ8N9B5 988 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 ENGASEQ8NFI3 743 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 TBCKQ8TEA7 893 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 WNK4Q96J92 1243 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 CLIC6Q96NY7 704 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 TMOD4Q9NZQ9 345 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 KCNH4Q9UQ05 1017 aa16.28■□□□□ 0.2
USP39-220ENST00000613444 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 A0A0G2JLL6 359 aaPredicted RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 NR1I2O75469 434 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 GRIN1Q05586 938 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 TRAF1Q13077 416 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 PTGDRQ13258 359 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 SNW1Q13573 536 aaKnown RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 PRRT2Q7Z6L0 340 aaPredicted RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 KRI1Q8N9T8 703 aaKnown RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 REPS2Q8NFH8 660 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
USP39-220ENST00000613444 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.2
USP39-220ENST00000613444 PIK3CDO00329 1044 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 VWA5AO00534 786 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 CXCL11O14625 94 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 CUTAO60888 179 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 BMP15O95972 392 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 CMA1P23946 247 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 MCM7P33993 719 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 PPIL2Q13356 520 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 SHC4Q6S5L8 630 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 NEK8Q86SG6 692 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.19
USP39-220ENST00000613444 ATG4CQ96DT6 458 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
USP39-220ENST00000613444 UNCXA6NJT0 531 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 DSG3P32926 999 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 GJA5P36382 358 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 FSIP1Q8NA03 581 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 ZNF408Q9H9D4 720 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 ABCB11O95342 1321 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 FAM237AA0A1B0GTK4 181 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 ITGBL1O95965 494 aaPredicted RBP16.26■□□□□ 0.19
USP39-220ENST00000613444 FDX1P10109 184 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 MOGSQ13724 837 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 COG2Q14746 738 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 CRYGNQ8WXF5 182 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
USP39-220ENST00000613444 TBC1D5Q92609 795 aa16.26■□□□□ 0.19
USP39-220ENST00000613444 A0A1B0GVL5 298 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 AP3B2Q13367 1082 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 IL17AQ16552 155 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 RESP18Q5W5W9 173 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 FMR1NBQ8N0W7 255 aaPredicted RBP16.25■□□□□ 0.19
USP39-220ENST00000613444 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
USP39-220ENST00000613444 TMEM60Q9H2L4 133 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 CCPG1Q9ULG6 757 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
USP39-220ENST00000613444 MYPNQ86TC9 1320 aa16.25■□□□□ 0.19
USP39-220ENST00000613444 NDUFA8P51970 172 aa16.24■□□□□ 0.19
USP39-220ENST00000613444 FKBP1BP68106 108 aa16.24■□□□□ 0.19
USP39-220ENST00000613444 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
USP39-220ENST00000613444 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms