RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 KIAA2013Q8IYS2 634 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CAB39Q9Y376 341 aaPredicted RBP11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TELO2Q9Y4R8 837 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PTPDC1A2A3K4 754 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 EVI5O60447 810 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ATP2B4P23634 1241 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 INTS13Q9NVM9 706 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 USE1Q9NZ43 259 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RBM8AQ9Y5S9 174 aaKnown RBP11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GOLGA8CPA6NN73 597 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 THAP12O43422 761 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 VSIG1Q86XK7 387 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TRIM50Q86XT4 487 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 STX12Q86Y82 276 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CAPN7Q9Y6W3 813 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SPATA31E1Q6ZUB1 1445 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IQCMA0A1B0GVH7 501 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PFDN6O15212 129 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ARHGAP4P98171 946 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ATP8B2P98198 1209 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DCUN1D2Q6PH85 259 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ATP10BO94823 1461 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 N4BP3O15049 544 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 EPN2O95208 641 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CHPF2Q9P2E5 772 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ADGRL1O94910 1474 aa11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TRIM64A6NGJ6 449 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GOLGA8RI6L899 631 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CAPN2P17655 700 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DENND2CQ68D51 928 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 P3H4Q92791 437 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NSD2O96028 1365 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RHOXF2BP0C7M4 288 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 LRMPQ12912 555 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RHOXF2Q9BQY4 288 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ZBTB3Q9H5J0 574 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NUMA1Q14980 2115 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 STARD3NLO95772 234 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TBC1D10BQ4KMP7 808 aaPredicted RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PIDD1Q9HB75 910 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SLC8A2Q9UPR5 921 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ZNF213O14771 459 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 P4HA2O15460 535 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SYNCRIPO60506 623 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 STX1BP61266 288 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 UVSSAQ2YD98 709 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 OLFML2AQ68BL7 652 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TXLNGQ9NUQ3 528 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 N6AMT1Q9Y5N5 214 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 BIVM-ERCC5R4GMW8 1640 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MAFKO60675 156 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 KRT83P78385 493 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DEUP1Q05D60 604 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NCLNQ969V3 563 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DBF4Q9UBU7 674 aaPredicted RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CHMLP26374 656 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PHBP35232 272 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DEPDC1Q5TB30 811 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RPRD1BQ9NQG5 326 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 UBAP1Q9NZ09 502 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SAP30BPQ9UHR5 308 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IPO11Q9UI26 975 aaKnown RBP11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
CNTNAP3B-211ENST00000612828 A8MXQ7 604 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SNX2O60749 519 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SYT1P21579 422 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 EIF2S3P41091 472 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PTPN9P43378 593 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PHKA1P46020 1223 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DHX9Q08211 1270 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TTC23Q5W5X9 447 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 STOML2Q9UJZ1 356 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 LRCH1Q9Y2L9 728 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RPN2P04844 631 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PTPN1P18031 435 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ITGA3P26006 1051 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 HADHAP40939 763 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SNAP25P60880 206 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 YWHAHQ04917 246 aaPredicted RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DCAF4L1Q3SXM0 396 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TMEM154Q6P9G4 183 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PARVGQ9HBI0 331 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CPSF3Q9UKF6 684 aaKnown RBP11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CNGA2Q16280 664 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ANO1Q5XXA6 986 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CATSPER3Q86XQ3 398 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PALB2Q86YC2 1186 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RSAD2Q8WXG1 361 aa11.78□□□□□ -0.52
CNTNAP3B-211ENST00000612828 KIFAP3Q92845 792 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms