RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ZNF536O15090 1300 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 SPDYE16A6NNV3 312 aaPredicted RBP20.09■□□□□ 0.81
SREK1-216ENST00000612404 M0R2N6 131 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 CETPP11597 493 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 JAKMIP3Q5VZ66 844 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 ZBTB48P10074 688 aaPredicted RBP20.08■□□□□ 0.81
SREK1-216ENST00000612404 ATP2B1P20020 1258 aa20.08■□□□□ 0.81
SREK1-216ENST00000612404 UBE2SQ16763 222 aa20.08■□□□□ 0.81
SREK1-216ENST00000612404 ATL3Q6DD88 541 aa20.08■□□□□ 0.81
SREK1-216ENST00000612404 GLT8D2Q9H1C3 349 aa20.08■□□□□ 0.81
SREK1-216ENST00000612404 MYPNQ86TC9 1320 aa20.08■□□□□ 0.81
SREK1-216ENST00000612404 CCL15-CCL14A0A0B4J2E2 113 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 DDX11L8A8MPP1 907 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.8
SREK1-216ENST00000612404 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.8
SREK1-216ENST00000612404 CCL15Q16663 113 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 RILPL1Q5EBL4 403 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 ZNF784Q8NCA9 323 aaPredicted RBP20.08■□□□□ 0.8
SREK1-216ENST00000612404 SPATA32Q96LK8 384 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 SCAND2PQ9GZW5 306 aaPredicted RBP20.08■□□□□ 0.8
SREK1-216ENST00000612404 ASCC2Q9H1I8 757 aaPredicted RBP20.08■□□□□ 0.8
SREK1-216ENST00000612404 TMEM260Q9NX78 707 aa20.08■□□□□ 0.8
SREK1-216ENST00000612404 MRPL11Q9Y3B7 192 aaKnown RBP20.08■□□□□ 0.8
SREK1-216ENST00000612404 ABCB11O95342 1321 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 ALAS1P13196 640 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 MS4A4AQ96JQ5 239 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 P2RX7Q99572 595 aaKnown RBP20.07■□□□□ 0.8
SREK1-216ENST00000612404 HOMER2Q9NSB8 354 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 ABT1Q9ULW3 272 aaKnown RBP20.07■□□□□ 0.8
SREK1-216ENST00000612404 NOL7Q9UMY1 257 aaKnown RBP20.07■□□□□ 0.8
SREK1-216ENST00000612404 ADAMTS5Q9UNA0 930 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 CLIC4Q9Y696 253 aa20.07■□□□□ 0.8
SREK1-216ENST00000612404 TOB1P50616 345 aaPredicted RBP20.06■□□□□ 0.8
SREK1-216ENST00000612404 NBR1Q14596 966 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 KRT25Q7Z3Z0 450 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 COL11A1P12107 1806 aaPredicted RBP20.06■□□□□ 0.8
SREK1-216ENST00000612404 OSBPP22059 807 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 PLS1Q14651 629 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 CSPP1Q1MSJ5 1256 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 RGMBQ6NW40 437 aa20.06■□□□□ 0.8
SREK1-216ENST00000612404 OPLAHO14841 1288 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 TMEM132BQ14DG7 1078 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 ANO1Q5XXA6 986 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 RASAL3Q86YV0 1011 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 REPS2Q8NFH8 660 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 LEO1Q8WVC0 666 aaPredicted RBP20.05■□□□□ 0.8
SREK1-216ENST00000612404 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 PNMA2Q9UL42 364 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 TLL2Q9Y6L7 1015 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 TMEM88BA6NKF7 163 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 CFBP00751 764 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 NONOQ15233 471 aaKnown RBP eCLIP20.05■□□□□ 0.8
SREK1-216ENST00000612404 SF3A1Q15459 793 aaKnown RBP20.05■□□□□ 0.8
SREK1-216ENST00000612404 INF2Q27J81 1249 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 SNRNP48Q6IEG0 339 aaKnown RBP20.05■□□□□ 0.8
SREK1-216ENST00000612404 BRI3BPQ8WY22 251 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 POLR3EQ9NVU0 708 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 RTEL1Q9NZ71 1219 aa20.05■□□□□ 0.8
SREK1-216ENST00000612404 MEIS2O14770 477 aa20.04■□□□□ 0.8
SREK1-216ENST00000612404 HOXA13P31271 388 aaPredicted RBP20.04■□□□□ 0.8
SREK1-216ENST00000612404 CLK2P49760 499 aaKnown RBP20.04■□□□□ 0.8
SREK1-216ENST00000612404 OAZ1P54368 228 aa20.04■□□□□ 0.8
SREK1-216ENST00000612404 HERVK_113P62684 666 aa20.04■□□□□ 0.8
SREK1-216ENST00000612404 STK38Q15208 465 aa20.04■□□□□ 0.8
SREK1-216ENST00000612404 ZNF214Q9UL59 606 aaPredicted RBP20.04■□□□□ 0.8
SREK1-216ENST00000612404 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
SREK1-216ENST00000612404 FSTL1Q12841 308 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 TEX13BQ9BXU2 312 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 BTBD19C9JJ37 291 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 GCOM1H8Y6P7 765 aaPredicted RBP20.03■□□□□ 0.8
SREK1-216ENST00000612404 PDHXO00330 501 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 POLR2MP0CAP2 368 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 LBX2Q6XYB7 198 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 MB21D1Q8N884 522 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 TMEM87AQ8NBN3 555 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 TBC1D5Q92609 795 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 TRERF1Q96PN7 1200 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 PAGR1Q9BTK6 254 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 PNMA3Q9UL41 463 aa20.03■□□□□ 0.8
SREK1-216ENST00000612404 NFIBO00712 420 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 STAT3P40763 770 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 NASPP49321 788 aaPredicted RBP20.02■□□□□ 0.8
SREK1-216ENST00000612404 TTC38Q5R3I4 469 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 TBCKQ8TEA7 893 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 RCOR1Q9UKL0 485 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
SREK1-216ENST00000612404 SPDYE3A6NKU9 549 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 ATP2A1O14983 1001 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 PEX10O60683 326 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 MUM1L1Q5H9M0 696 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 POTEEQ6S8J3 1075 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 CLEC4DQ8WXI8 215 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 RNF146Q9NTX7 359 aa20.02■□□□□ 0.79
SREK1-216ENST00000612404 BTBD7Q9P203 1132 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms