RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CABYRO75952 493 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 FLOT1O75955 427 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 ACTN1P12814 892 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 COL19A1Q14993 1142 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 SEPT2Q15019 361 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 TRIM67Q6ZTA4 783 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 FBXL6Q8N531 539 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 IRF2BPLQ9H1B7 796 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 EHD4Q9H223 541 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 CABP5Q9NP86 173 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 SERPINB13Q9UIV8 391 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 SIP14410 1827 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 PRR23AA6NEV1 266 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 E9PSI1 815 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 SHMT1P34896 483 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 STAT3P40763 770 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 VCPP55072 806 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 TMCO2Q7Z6W1 182 aaPredicted RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 SUGP1Q8IWZ8 645 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 PABPC5Q96DU9 382 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 FGD4Q96M96 766 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 NOL10Q9BSC4 688 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 KATNBL1Q9H079 304 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 ALDH8A1Q9H2A2 487 aaPredicted RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 ABHD16BQ9H3Z7 469 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 LRP2BPQ9P2M1 347 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 MTUS1Q9ULD2 1270 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 PA2G4Q9UQ80 394 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 FAM50BQ9Y247 325 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 KMT2BQ9UMN6 2715 aaPredicted RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 TPRP12270 2363 aaKnown RBP8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 DCHS1Q96JQ0 3298 aa8.78□□□□□ -1
PTCHD3P1-201ENST00000612350 EPG5Q9HCE0 2579 aa8.77□□□□□ -1
PTCHD3P1-201ENST00000612350 H0Y858 1186 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 CYP2C9P11712 490 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 RFC2P35250 354 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 PSMC6P62333 389 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MVPQ14764 893 aaKnown RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 SMAD2Q15796 467 aaKnown RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 NAA16Q6N069 864 aaPredicted RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 SIAH1Q8IUQ4 282 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ZNF687Q8N1G0 1237 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 REPS2Q8NFH8 660 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TGS1Q96RS0 853 aaKnown RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 FSD1Q9BTV5 496 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TLR9Q9NR96 1032 aa8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ZNF214Q9UL59 606 aaPredicted RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 GNEQ9Y223 722 aaKnown RBP8.77□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MYO7AQ13402 2215 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 LINC01553A4QN01 128 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 BAIAP3O94812 1187 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 IQCF3P0C7M6 154 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 PTGS1P23219 599 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ARID4AP29374 1257 aaPredicted RBP8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 AVPR2P30518 371 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 LTBRP36941 435 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 NBL1P41271 181 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MCAMP43121 646 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 DYNLL1P63167 89 aaKnown RBP8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MAGEB6Q8N7X4 407 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MRPL38Q96DV4 380 aaKnown RBP8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TRMT13Q9NUP7 481 aaKnown RBP8.76□□□□□ -1.01
PTCHD3P1-201ENST00000612350 GVINP1Q7Z2Y8 2422 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MYO5AQ9Y4I1 1855 aaKnown RBP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 VWA5AO00534 786 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 COPB2P35606 906 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 PLCD1P51178 756 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 WDR5P61964 334 aaKnown RBP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ZXDAP98168 799 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 GABPAQ06546 454 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 GPNMBQ14956 572 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 FSCN1Q16658 493 aaKnown RBP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ARMCX2Q7L311 632 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 SPICE1Q8N0Z3 855 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 DDX11Q96FC9 970 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 CNTNAP3BQ96NU0 1288 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 CNTNAP3Q9BZ76 1288 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 FTOQ9C0B1 505 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 VCPKMTQ9H867 229 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 FBXO28Q9NVF7 368 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TMX2Q9Y320 296 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 RIPK3Q9Y572 518 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TRIP12Q14669 1992 aaPredicted RBP8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 TNKSO95271 1327 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
PTCHD3P1-201ENST00000612350 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
PTCHD3P1-201ENST00000612350 WDR46O15213 610 aaKnown RBP8.74□□□□□ -1.01
PTCHD3P1-201ENST00000612350 MBTPS2O43462 519 aa8.74□□□□□ -1.01
PTCHD3P1-201ENST00000612350 GJB5O95377 273 aa8.74□□□□□ -1.01
PTCHD3P1-201ENST00000612350 CT47B1P0C2W7 299 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms