RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 MS4A4AQ96JQ5 239 aa22.44■■□□□ 1.18
SRRM3-205ENST00000612155 UNCXA6NJT0 531 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 CMA1P23946 247 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 KIF5BP33176 963 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 GNL2Q13823 731 aaKnown RBP22.43■■□□□ 1.18
SRRM3-205ENST00000612155 RNF26Q9BY78 433 aaPredicted RBP22.43■■□□□ 1.18
SRRM3-205ENST00000612155 CXCL11O14625 94 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 PLCB2Q00722 1185 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 SNAPC2Q13487 334 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 ASPRV1Q53RT3 343 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 SH3D19Q5HYK7 790 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 SHC4Q6S5L8 630 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 HOMER1Q86YM7 354 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 KIFC2Q96AC6 838 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 CLIC6Q96NY7 704 aa22.43■■□□□ 1.18
SRRM3-205ENST00000612155 FAM155AB1AL88 458 aaPredicted RBP22.42■■□□□ 1.18
SRRM3-205ENST00000612155 PEX10O60683 326 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 PFKFB1P16118 471 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 TAL1P17542 331 aaPredicted RBP22.42■■□□□ 1.18
SRRM3-205ENST00000612155 ZNF165P49910 485 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 BRI3BPQ8WY22 251 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 LPAR1Q92633 364 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 CCL15-CCL14A0A0B4J2E2 113 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 PPP6R2O75170 966 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 IQCB1Q15051 598 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 PPP2R5BQ15173 497 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 CCL15Q16663 113 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 ADGRF4Q8IZF3 695 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 RBM28Q9NW13 759 aaKnown RBP22.42■■□□□ 1.18
SRRM3-205ENST00000612155 SYNPO2Q9UMS6 1093 aa22.42■■□□□ 1.18
SRRM3-205ENST00000612155 V9GY48 417 aaPredicted RBP22.42■■□□□ 1.18
SRRM3-205ENST00000612155 CNTNAP5Q8WYK1 1306 aa22.41■■□□□ 1.18
SRRM3-205ENST00000612155 WDR46O15213 610 aaKnown RBP22.41■■□□□ 1.18
SRRM3-205ENST00000612155 FLOT1O75955 427 aa22.41■■□□□ 1.18
SRRM3-205ENST00000612155 SLC10A3P09131 477 aa22.41■■□□□ 1.18
SRRM3-205ENST00000612155 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
SRRM3-205ENST00000612155 FOXP1Q9H334 677 aaPredicted RBP22.41■■□□□ 1.18
SRRM3-205ENST00000612155 VPS54Q9P1Q0 977 aa22.41■■□□□ 1.18
SRRM3-205ENST00000612155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.41■■□□□ 1.18
SRRM3-205ENST00000612155 PRPF3O43395 683 aaKnown RBP22.4■■□□□ 1.18
SRRM3-205ENST00000612155 ZNF202O95125 648 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 STAT2P52630 851 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 GPATCH4Q5T3I0 446 aaKnown RBP22.4■■□□□ 1.18
SRRM3-205ENST00000612155 ZNF830Q96NB3 372 aaPredicted RBP22.4■■□□□ 1.18
SRRM3-205ENST00000612155 PTPN18Q99952 460 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 AOC2O75106 756 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 ZBTB48P10074 688 aaPredicted RBP22.4■■□□□ 1.18
SRRM3-205ENST00000612155 GPAT2Q6NUI2 795 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 PIGSQ96S52 555 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.4■■□□□ 1.18
SRRM3-205ENST00000612155 HPSEQ9Y251 543 aa22.4■■□□□ 1.18
SRRM3-205ENST00000612155 FAM205CA6NFA0 338 aa22.39■■□□□ 1.18
SRRM3-205ENST00000612155 PTMAP06454 111 aaKnown RBP22.39■■□□□ 1.18
SRRM3-205ENST00000612155 GTF2A2P52657 109 aa22.39■■□□□ 1.18
SRRM3-205ENST00000612155 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.18
SRRM3-205ENST00000612155 EARS2Q5JPH6 523 aaKnown RBP22.39■■□□□ 1.18
SRRM3-205ENST00000612155 JMJD4Q9H9V9 463 aa22.39■■□□□ 1.18
SRRM3-205ENST00000612155 PRR12Q9ULL5 1215 aa22.39■■□□□ 1.18
SRRM3-205ENST00000612155 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.17
SRRM3-205ENST00000612155 STX1AQ16623 288 aa22.39■■□□□ 1.17
SRRM3-205ENST00000612155 SDF4Q9BRK5 362 aa22.39■■□□□ 1.17
SRRM3-205ENST00000612155 BTBD19C9JJ37 291 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
SRRM3-205ENST00000612155 NPY5RQ15761 445 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 SYDE2Q5VT97 1194 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 PCDHB6Q9Y5E3 794 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 LOC285556D6RIA3 1793 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 FAM237AA0A1B0GTK4 181 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 ZNF500O60304 480 aaPredicted RBP22.38■■□□□ 1.17
SRRM3-205ENST00000612155 GRIN1Q05586 938 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 RESP18Q5W5W9 173 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 CATSPERGQ6ZRH7 1159 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 PROCA1Q8NCQ7 364 aaPredicted RBP22.38■■□□□ 1.17
SRRM3-205ENST00000612155 ATG4CQ96DT6 458 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 PHF20Q9BVI0 1012 aa22.38■■□□□ 1.17
SRRM3-205ENST00000612155 CYP2C8P10632 490 aa22.37■■□□□ 1.17
SRRM3-205ENST00000612155 CETPP11597 493 aa22.37■■□□□ 1.17
SRRM3-205ENST00000612155 NOM1Q5C9Z4 860 aaKnown RBP22.37■■□□□ 1.17
SRRM3-205ENST00000612155 CCDC174Q6PII3 467 aa22.37■■□□□ 1.17
SRRM3-205ENST00000612155 GPKOWQ92917 476 aaPredicted RBP eCLIP22.37■■□□□ 1.17
SRRM3-205ENST00000612155 KIAA1468Q9P260 1216 aa22.37■■□□□ 1.17
SRRM3-205ENST00000612155 AGTPBP1Q9UPW5 1226 aa22.37■■□□□ 1.17
SRRM3-205ENST00000612155 ADAMTS3O15072 1205 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 GNAQP50148 359 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 CAPNS2Q96L46 248 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 SLF1Q9BQI6 1058 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 RIOX1Q9H6W3 641 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 FEM1BQ9UK73 627 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 RASSF10A6NK89 507 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L15C9J2P7 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L13C9JLJ4 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L11C9JVI0 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L18D6R9N7 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L22D6RA61 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L17D6RBQ6 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L19D6RCP7 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L20D6RJB6 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 USP17L24Q0WX57 530 aa22.36■■□□□ 1.17
SRRM3-205ENST00000612155 POTEEQ6S8J3 1075 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms