RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CDK8P49336 464 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 ZSCAN26Q16670 478 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 RAD9BQ6WBX8 426 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.87
LIG4-204ENST00000611712 ELOA2Q8IYF1 753 aaPredicted RBP9.65□□□□□ -0.87
LIG4-204ENST00000611712 AFAP1L1Q8TED9 768 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 SLC4A9Q96Q91 983 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 ZCCHC17Q9NP64 241 aaKnown RBP9.65□□□□□ -0.87
LIG4-204ENST00000611712 NARFQ9UHQ1 456 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 SLIT3O75094 1523 aa9.65□□□□□ -0.87
LIG4-204ENST00000611712 ZMYND10O75800 440 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 LRRC41Q15345 812 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 FAM196AQ6ZSG2 479 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 STXBP4Q6ZWJ1 553 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 MARCH10Q8NA82 808 aaPredicted RBP9.64□□□□□ -0.87
LIG4-204ENST00000611712 FAM76AQ8TAV0 307 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 LARP4BQ92615 738 aaKnown RBP9.64□□□□□ -0.87
LIG4-204ENST00000611712 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
LIG4-204ENST00000611712 PSTPIP2Q9H939 334 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 TTC26A0AVF1 554 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 LGALS16A8MUM7 142 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 SCNN1DP51172 638 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 ZBED6P86452 979 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 IFFO1Q0D2I5 559 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 TNIP1Q15025 636 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 SEC23AQ15436 765 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 C10orf67Q8IYJ2 551 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 SELENOOQ9BVL4 669 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 FAM107BQ9H098 131 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 ANAPC4Q9UJX5 808 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 MAP3K9P80192 1104 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 KLHL30Q0D2K2 578 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 SFMBT2Q5VUG0 894 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 IQCDQ96DY2 449 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 SAMM50Q9Y512 469 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 GOLGA6BA6NDN3 693 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 FAM13AO94988 1023 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 CETN1Q12798 172 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 TXNRD1Q16881 649 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 FAM26FQ5R3K3 315 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 RIOK1Q9BRS2 568 aaKnown RBP9.64□□□□□ -0.87
LIG4-204ENST00000611712 NT5C3AQ9H0P0 336 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 PLEKHA4Q9H4M7 779 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 ABCB6Q9NP58 842 aa9.64□□□□□ -0.87
LIG4-204ENST00000611712 DDX25Q9UHL0 483 aaKnown RBP9.64□□□□□ -0.87
LIG4-204ENST00000611712 BAZ2BQ9UIF8 2168 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 CNTNAP5Q8WYK1 1306 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 CD44P16070 742 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 RPL13P26373 211 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 GYS2P54840 703 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 GRAPQ13588 217 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 GRM4Q14833 912 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 C12orf60Q5U649 245 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 GRAPLQ8TC17 118 aaPredicted RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 NHEJ1Q9H9Q4 299 aaPredicted RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 RIC1Q4ADV7 1423 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 BUB1O43683 1085 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 KLRK1P26718 216 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 ASIC2Q16515 512 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 USH1GQ495M9 461 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 CFAP58Q5T655 872 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 LSM14BQ9BX40 385 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 GLT8D2Q9H1C3 349 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 EHMT1Q9H9B1 1298 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 USP21Q9UK80 565 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 SLC16A2P36021 539 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 EARS2Q5JPH6 523 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 HS2ST1Q7LGA3 356 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 FBXO33Q7Z6M2 555 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 CHP1Q99653 195 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
LIG4-204ENST00000611712 DNM3Q9UQ16 869 aa9.63□□□□□ -0.87
LIG4-204ENST00000611712 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 SMIM22K7EJ46 135 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 ZEB2O60315 1214 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 GYPCP04921 128 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 TNNC1P63316 161 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 PKN1Q16512 942 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 LRRN4CLQ8ND94 238 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 CHMP2AO43633 222 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 POLR2FP61218 127 aaKnown RBP9.62□□□□□ -0.87
LIG4-204ENST00000611712 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 TAX1BP1Q86VP1 789 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 TBC1D5Q92609 795 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 RABEP2Q9H5N1 569 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 SRGAP2O75044 1071 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 EPB41P11171 864 aaKnown RBP9.62□□□□□ -0.87
LIG4-204ENST00000611712 ZNF18P17022 549 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 BMP6P22004 513 aa9.62□□□□□ -0.87
LIG4-204ENST00000611712 HMGB2P26583 209 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms