RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-203ENST00000607448 GADD45BO75293 160 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-203ENST00000607448 LARGE1O95461 756 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 SLC25A27O95847 323 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 TAL1P17542 331 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-203ENST00000607448 SNAP25P60880 206 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 RCSD1Q6JBY9 416 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.21□□□□□ -0.46
LINC01001-203ENST00000607448 GMCL1Q96IK5 515 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 MAML3Q96JK9 1138 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 SLC38A10Q9HBR0 1119 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 FEM1BQ9UK73 627 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 CNPY2Q9Y2B0 182 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 ZNF536O15090 1300 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 LAMA3Q16787 3333 aa12.21□□□□□ -0.46
LINC01001-203ENST00000607448 TPM2P07951 284 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 FCER1AP12319 257 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 CYBAP13498 195 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 SLC1A4P43007 532 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 STAT2P52630 851 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 TERF1P54274 439 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 ME3Q16798 604 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 MMP19Q99542 508 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 DSCC1Q9BVC3 393 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 TEX13BQ9BXU2 312 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 OGDHLQ9ULD0 1010 aa12.2□□□□□ -0.46
LINC01001-203ENST00000607448 ZNF213O14771 459 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ATP2A1O14983 1001 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 OFD1O75665 1012 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 CPA1P15085 419 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ZNF792Q3KQV3 632 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 MFSD14CQ5VZR4 134 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ANO1Q5XXA6 986 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ABRAQ8N0Z2 381 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 TPCN1Q9ULQ1 816 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ZKSCAN5Q9Y2L8 839 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 PFASO15067 1338 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 ELP1O95163 1332 aa12.19□□□□□ -0.46
LINC01001-203ENST00000607448 FRMPD2Q68DX3 1309 aaPredicted RBP12.19□□□□□ -0.46
LINC01001-203ENST00000607448 H0YGN5 161 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 ZBED4O75132 1171 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 KDM4AO75164 1064 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 CNGA1P29973 690 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
LINC01001-203ENST00000607448 LARP1BQ659C4 914 aaKnown RBP12.18□□□□□ -0.46
LINC01001-203ENST00000607448 DPF3Q92784 378 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 B4E1Z4 1266 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 HMGB1P09429 215 aaKnown RBP12.18□□□□□ -0.46
LINC01001-203ENST00000607448 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
LINC01001-203ENST00000607448 SLC16A2P36021 539 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 KRT85P78386 507 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 KCTD2Q14681 263 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 FGD4Q96M96 766 aa12.18□□□□□ -0.46
LINC01001-203ENST00000607448 DDX20Q9UHI6 824 aaKnown RBP12.18□□□□□ -0.46
LINC01001-203ENST00000607448 DNAJC25-GNG10A0A024R161 153 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 VPS37CA5D8V6 355 aaPredicted RBP12.17□□□□□ -0.46
LINC01001-203ENST00000607448 PDHBP11177 359 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
LINC01001-203ENST00000607448 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 CCDC174Q6PII3 467 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
LINC01001-203ENST00000607448 NECAB2Q7Z6G3 386 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 ESR2Q92731 530 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
LINC01001-203ENST00000607448 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
LINC01001-203ENST00000607448 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
LINC01001-203ENST00000607448 FIBPO43427 364 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 PLA2G6O60733 806 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 PCP11498 1178 aaKnown RBP12.16□□□□□ -0.46
LINC01001-203ENST00000607448 COL6A1P12109 1028 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 TOB2Q14106 344 aaPredicted RBP12.16□□□□□ -0.46
LINC01001-203ENST00000607448 IMMTQ16891 758 aaKnown RBP12.16□□□□□ -0.46
LINC01001-203ENST00000607448 FAM160B2Q86V87 743 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 CHURC1Q8WUH1 139 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 DCAF4Q8WV16 495 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 LENG1Q96BZ8 264 aaPredicted RBP12.16□□□□□ -0.46
LINC01001-203ENST00000607448 TINF2Q9BSI4 451 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 SCAND2PQ9GZW5 306 aaPredicted RBP12.16□□□□□ -0.46
LINC01001-203ENST00000607448 CPVLQ9H3G5 476 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 C11orf49Q9H6J7 331 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
LINC01001-203ENST00000607448 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms