RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	NOL6	Q9H6R4	1146 aa	Known RBP	6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	METTL5	Q9NRN9	209 aa	Known RBP	6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	SF3B6	Q9Y3B4	125 aa	Known RBP	6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZNF451	Q9Y4E5	1061 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	CD3E	P07766	207 aa		6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	BICRAL	Q6AI39	1079 aa		6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	LSR	Q86X29	649 aa	Predicted RBP	6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZDHHC14	Q8IZN3	488 aa		6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	SYT8	Q8NBV8	401 aa		6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZDHHC15	Q96MV8	337 aa		6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	SRRT	Q9BXP5	876 aa	Known RBP	6.54	□□□□□ -1.36
LAMA4-222	ENST00000604740	DBH	P09172	617 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	IFNGR1	P15260	489 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	PFKL	P17858	780 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	TACR1	P25103	407 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	LIMS1	P48059	325 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	PAQR3	Q6TCH7	311 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	CCDC81	Q6ZN84	652 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	LINC01356	Q8N9X3	169 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	RGS22	Q8NE09	1264 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	RNF34	Q969K3	372 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	PTCHD1	Q96NR3	888 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	FCRL3	Q96P31	734 aa	Predicted RBP	6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	KRTAP9-3	Q9BYQ3	159 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	PDLIM7	Q9NR12	457 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	HCFC2	Q9Y5Z7	792 aa		6.53	□□□□□ -1.36
LAMA4-222	ENST00000604740	SRGAP3	O43295	1099 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	CYBB	P04839	570 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	RACK1	P63244	317 aa	Known RBP	6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	POU4F1	Q01851	419 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	PPP2R5D	Q14738	602 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	TCEAL1	Q15170	157 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	TMCO4	Q5TGY1	634 aa		6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	ZNF214	Q9UL59	606 aa	Predicted RBP	6.52	□□□□□ -1.37
LAMA4-222	ENST00000604740	TBC1D8	O95759	1140 aa		6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	TARBP2	Q15633	366 aa	Known RBP	6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	ADCY4	Q8NFM4	1077 aa		6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	CXorf38	Q8TB03	319 aa		6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	CRBN	Q96SW2	442 aa		6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	LUC7L	Q9NQ29	371 aa	Known RBP	6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	DBR1	Q9UK59	544 aa	Known RBP	6.51	□□□□□ -1.37
LAMA4-222	ENST00000604740	IRS2	Q9Y4H2	1338 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	CBFA2T2	O43439	604 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	IGFBP6	P24592	240 aa	Predicted RBP	6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	L1CAM	P32004	1257 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	CORO7	P57737	925 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	NLGN1	Q8N2Q7	840 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	HAUS7	Q99871	368 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	ADAM7	Q9H2U9	754 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	WHRN	Q9P202	907 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	DDX41	Q9UJV9	622 aa	Known RBP	6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	PLA2G2D	Q9UNK4	145 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740	LTBP3	Q9NS15	1303 aa		6.5	□□□□□ -1.37
LAMA4-222	ENST00000604740		F8W031	263 aa	Predicted RBP	6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	PAK2	Q13177	524 aa		6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	GNPTAB	Q3T906	1256 aa		6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	ERICH6B	Q5W0A0	696 aa		6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	GINM1	Q9NU53	330 aa		6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740	FAN1	Q9Y2M0	1017 aa		6.49	□□□□□ -1.37
LAMA4-222	ENST00000604740		A0A087WZG4	1122 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	ZC3H12D	A2A288	527 aa	Known RBP	6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	STXBP3	O00186	592 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	FFAR3	O14843	346 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	CELA3B	P08861	270 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	FBLN1	P23142	703 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	PRR5	P85299	388 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	COL9A2	Q14055	689 aa	Predicted RBP	6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	HEATR6	Q6AI08	1181 aa	Known RBP	6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	RCSD1	Q6JBY9	416 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	ZNF654	Q8IZM8	581 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	GBP3	Q9H0R5	595 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	SUSD2	Q9UGT4	822 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	PCDHB10	Q9UN67	800 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	EFR3B	Q9Y2G0	817 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	DIS3	Q9Y2L1	958 aa	Known RBP	6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	SLC12A7	Q9Y666	1083 aa		6.48	□□□□□ -1.37
LAMA4-222	ENST00000604740	RECK	O95980	971 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	EIF6	P56537	245 aa	Known RBP	6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	DPY19L1	Q2PZI1	675 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	EEF1DP3	Q658K8	133 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	ADAT2	Q7Z6V5	191 aa	Known RBP	6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	CABP7	Q86V35	215 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	ALG3	Q92685	438 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	TEPSIN	Q96N21	525 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	MCMBP	Q9BTE3	642 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	KLHL25	Q9H0H3	589 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	PHAX	Q9H814	394 aa	Known RBP	6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	RXFP1	Q9HBX9	757 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	PMF1-BGLAP	U3KQ54	211 aa		6.47	□□□□□ -1.37
LAMA4-222	ENST00000604740	AURKA	O14965	403 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	VAMP4	O75379	141 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	PLA2G1B	P04054	148 aa	Known RBP	6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	EPHX1	P07099	455 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	ATF2	P15336	505 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	MC3R	P41968	323 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	KCNC1	P48547	511 aa		6.46	□□□□□ -1.38
LAMA4-222	ENST00000604740	SLURP1	P55000	103 aa		6.46	□□□□□ -1.38

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