RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
SSBP4-213ENST00000602088 DHX16O60231 1041 aaKnown RBP19.49■□□□□ 0.71
SSBP4-213ENST00000602088 MSCO60682 206 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 FARP2O94887 1054 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-213ENST00000602088 HSPA4P34932 840 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 EXOSC10Q01780 885 aaKnown RBP19.49■□□□□ 0.71
SSBP4-213ENST00000602088 NSMFQ6X4W1 530 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 CLEC4DQ8WXI8 215 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 MAP3K14Q99558 947 aa19.49■□□□□ 0.71
SSBP4-213ENST00000602088 SOWAHBA6NEL2 793 aa19.48■□□□□ 0.71
SSBP4-213ENST00000602088 SNAI1O95863 264 aaPredicted RBP19.48■□□□□ 0.71
SSBP4-213ENST00000602088 MNX1P50219 401 aaPredicted RBP19.48■□□□□ 0.71
SSBP4-213ENST00000602088 QRICH1Q2TAL8 776 aa19.48■□□□□ 0.71
SSBP4-213ENST00000602088 USH1GQ495M9 461 aa19.48■□□□□ 0.71
SSBP4-213ENST00000602088 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
SSBP4-213ENST00000602088 MTMR8Q96EF0 704 aa19.48■□□□□ 0.71
SSBP4-213ENST00000602088 LRRC2Q9BYS8 371 aa19.48■□□□□ 0.71
SSBP4-213ENST00000602088 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 DDAH1O94760 285 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 ZNF865P0CJ78 1059 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-213ENST00000602088 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-213ENST00000602088 SLC35G1Q2M3R5 365 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 SGMS1Q86VZ5 419 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 FBXO11Q86XK2 927 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 NUP133Q8WUM0 1156 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
SSBP4-213ENST00000602088 RIOX1Q9H6W3 641 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 CNPY2Q9Y2B0 182 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 SNX14Q9Y5W7 946 aa19.47■□□□□ 0.71
SSBP4-213ENST00000602088 HMGB1P09429 215 aaKnown RBP19.46■□□□□ 0.71
SSBP4-213ENST00000602088 ARMCX2Q7L311 632 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 RGS22Q8NE09 1264 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 MYL10Q9BUA6 226 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-213ENST00000602088 ASTN1O14525 1302 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 ABCB11O95342 1321 aa19.46■□□□□ 0.71
SSBP4-213ENST00000602088 MYH6P13533 1939 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 PTPDC1A2A3K4 754 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 ASB14A6NK59 587 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 ZBTB5O15062 677 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 CYTH3O43739 400 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 RNF207Q6ZRF8 634 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 NECAB2Q7Z6G3 386 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-213ENST00000602088 DIS3LQ8TF46 1054 aaKnown RBP19.45■□□□□ 0.7
SSBP4-213ENST00000602088 PURBQ96QR8 312 aaKnown RBP19.45■□□□□ 0.7
SSBP4-213ENST00000602088 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 MAF1Q9H063 256 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 ABHD16BQ9H3Z7 469 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 FRMPD3Q5JV73 1810 aa19.45■□□□□ 0.7
SSBP4-213ENST00000602088 MCM3APO60318 1980 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 BAZ2BQ9UIF8 2168 aaKnown RBP19.44■□□□□ 0.7
SSBP4-213ENST00000602088 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-213ENST00000602088 CALM1P0DP23 149 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 CALM2P0DP24 149 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 CALM3P0DP25 149 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 KIF5BP33176 963 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
SSBP4-213ENST00000602088 ACVR2BQ13705 512 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 ANO1Q5XXA6 986 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 PIGSQ96S52 555 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 AMNQ9BXJ7 453 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 MRPL11Q9Y3B7 192 aaKnown RBP19.44■□□□□ 0.7
SSBP4-213ENST00000602088 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 LCTP09848 1927 aa19.44■□□□□ 0.7
SSBP4-213ENST00000602088 CALML3P27482 149 aa19.43■□□□□ 0.7
SSBP4-213ENST00000602088 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
SSBP4-213ENST00000602088 JAKMIP1Q96N16 626 aaKnown RBP19.43■□□□□ 0.7
SSBP4-213ENST00000602088 HTATIP2Q9BUP3 242 aa19.43■□□□□ 0.7
SSBP4-213ENST00000602088 KATNBL1Q9H079 304 aa19.43■□□□□ 0.7
SSBP4-213ENST00000602088 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
SSBP4-213ENST00000602088 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-213ENST00000602088 PNMA6FA0A0J9YX94 578 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 AKR1A1P14550 325 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 CPA1P15085 419 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 RXRAP19793 462 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 GNAQP50148 359 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 FANCBQ8NB91 859 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 MORC4Q8TE76 937 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 TBC1D5Q92609 795 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 LZTS2Q9BRK4 669 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 SPZ1Q9BXG8 430 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 C11orf49Q9H6J7 331 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 FAM184BQ9ULE4 1060 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 PCDHA1Q9Y5I3 950 aa19.42■□□□□ 0.7
SSBP4-213ENST00000602088 LOC102724159A0A0B4J2E5 919 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 RARBP10826 455 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 COL6A1P12109 1028 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 PSMA5P28066 241 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 ALDH5A1P51649 535 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-213ENST00000602088 TRAF1Q13077 416 aa19.41■□□□□ 0.7
SSBP4-213ENST00000602088 PWP2Q15269 919 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms