RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 LRRC47Q8N1G4 583 aaKnown RBP13.29□□□□□ -0.28
ZNF548-211ENST00000600927 SHCBP1Q8NEM2 672 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 GMCL1Q96IK5 515 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 ZNF396Q96N95 335 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-211ENST00000600927 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 SPATC1LQ9H0A9 340 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
ZNF548-211ENST00000600927 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
ZNF548-211ENST00000600927 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 VWA5AO00534 786 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 ADCY3O60266 1144 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 NMT2O60551 498 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 TOP1P11387 765 aaKnown RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 XRCC5P13010 732 aaKnown RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 UBE2HP62256 183 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 AKAP17AQ02040 695 aaKnown RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 FUT2Q10981 343 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 TRIM29Q14134 588 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 GRB14Q14449 540 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 TMEM132BQ14DG7 1078 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 MTFR1Q15390 333 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
ZNF548-211ENST00000600927 NUP88Q99567 741 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 ZNF214Q9UL59 606 aaPredicted RBP13.28□□□□□ -0.28
ZNF548-211ENST00000600927 COL11A1P12107 1806 aaPredicted RBP13.27□□□□□ -0.28
ZNF548-211ENST00000600927 IGHA2P01877 340 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 HOXC6P09630 235 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 ELNP15502 786 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 GSE1Q14687 1217 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 FOXD4L5Q5VV16 416 aaPredicted RBP13.27□□□□□ -0.29
ZNF548-211ENST00000600927 TMTC3Q6ZXV5 915 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.29
ZNF548-211ENST00000600927 TRIB2Q92519 343 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 NUDT12Q9BQG2 462 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
ZNF548-211ENST00000600927 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 ATP2A1O14983 1001 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 PLA2G6O60733 806 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 INHAP05111 366 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 PTPREP23469 700 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 U2AF2P26368 475 aaKnown RBP eCLIP13.26□□□□□ -0.29
ZNF548-211ENST00000600927 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
ZNF548-211ENST00000600927 GRM4Q14833 912 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SAFBQ15424 915 aaKnown RBP eCLIP13.26□□□□□ -0.29
ZNF548-211ENST00000600927 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SLFN13Q68D06 897 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SYAP1Q96A49 352 aaPredicted RBP13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 APBA2Q99767 749 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 MYL10Q9BUA6 226 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 SH3GLB2Q9NR46 395 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 RCOR1Q9UKL0 485 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 STX8Q9UNK0 236 aa13.26□□□□□ -0.29
ZNF548-211ENST00000600927 HMGCRP04035 888 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 BMP3P12645 472 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 ERCC3P19447 782 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 RXRAP19793 462 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 RGS2P41220 211 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 UBXN2AP68543 259 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 KRT40Q6A162 431 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZNF548-211ENST00000600927 RASGRP2Q7LDG7 609 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 RIOX2Q8IUF8 465 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 ABRAQ8N0Z2 381 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 PRPF38AQ8NAV1 312 aaKnown RBP13.25□□□□□ -0.29
ZNF548-211ENST00000600927 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 FOXP1Q9H334 677 aaPredicted RBP13.25□□□□□ -0.29
ZNF548-211ENST00000600927 MROH8Q9H579 483 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 PAK6Q9NQU5 681 aaPredicted RBP13.25□□□□□ -0.29
ZNF548-211ENST00000600927 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
ZNF548-211ENST00000600927 PALM3A6NDB9 673 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 STRNO43815 780 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 RAD21O60216 631 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 SLC25A27O95847 323 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 GJB1P08034 283 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 CCL5P13501 91 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 FERMT3Q86UX7 667 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 PHKBQ93100 1093 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 UNC93B1Q9H1C4 597 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 RTEL1Q9NZ71 1219 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 CNPY2Q9Y2B0 182 aa13.24□□□□□ -0.29
ZNF548-211ENST00000600927 MORC2Q9Y6X9 1032 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
ZNF548-211ENST00000600927 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 YEATS4O95619 227 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 MMP1P03956 469 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms