RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 Q9Y3F1 56 aa25.06■■□□□ 1.6
PNKP-212ENST00000599454 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.05■■□□□ 1.6
PNKP-212ENST00000599454 CSF2RAP15509 400 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 BEX3Q00994 111 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 GRIN2CQ14957 1233 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 KCTD1Q719H9 257 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 C16orf59Q7L2K0 433 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 OTUD7AQ8TE49 926 aaPredicted RBP25.05■■□□□ 1.6
PNKP-212ENST00000599454 IL17RBQ9NRM6 502 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 ANAPC4Q9UJX5 808 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 ASTN1O14525 1302 aa25.05■■□□□ 1.6
PNKP-212ENST00000599454 CDH23Q9H251 3354 aa25.04■■□□□ 1.6
PNKP-212ENST00000599454 FSCN1Q16658 493 aaKnown RBP25.04■■□□□ 1.6
PNKP-212ENST00000599454 IQSEC1Q6DN90 963 aa25.04■■□□□ 1.6
PNKP-212ENST00000599454 SYMPKQ92797 1274 aaKnown RBP25.04■■□□□ 1.6
PNKP-212ENST00000599454 PPP1R12CQ9BZL4 782 aa25.04■■□□□ 1.6
PNKP-212ENST00000599454 CYP39A1Q9NYL5 469 aa25.04■■□□□ 1.6
PNKP-212ENST00000599454 FOXP2O15409 715 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 NOVP48745 357 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 CTDSPL2Q05D32 466 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 CXCL17Q6UXB2 119 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 DCAF4Q8WV16 495 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 MTIF3Q9H2K0 278 aaKnown RBP25.03■■□□□ 1.6
PNKP-212ENST00000599454 VTA1Q9NP79 307 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 IL23AQ9NPF7 189 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 CCPG1Q9ULG6 757 aa25.03■■□□□ 1.6
PNKP-212ENST00000599454 ORC4O43929 436 aa25.02■■□□□ 1.6
PNKP-212ENST00000599454 ZNF365Q70YC5 407 aa25.02■■□□□ 1.6
PNKP-212ENST00000599454 ZBTB47Q9UFB7 747 aaPredicted RBP25.02■■□□□ 1.6
PNKP-212ENST00000599454 EYSQ5T1H1 3165 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 PRUNE2Q8WUY3 3088 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 LOC102724159A0A0B4J2E5 919 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 RANBP6O60518 1105 aaKnown RBP25.01■■□□□ 1.59
PNKP-212ENST00000599454 NMT2O60551 498 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 ICAM1P05362 532 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 SMPD1P17405 629 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 ITGA7Q13683 1181 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 PWP2Q15269 919 aaKnown RBP25.01■■□□□ 1.59
PNKP-212ENST00000599454 ALX1Q15699 326 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 MUM1L1Q5H9M0 696 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 MORC4Q8TE76 937 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 HERVK_113Q902F9 699 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 CHMP4CQ96CF2 233 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 EVI5LQ96CN4 794 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 PBX4Q9BYU1 374 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 SALL3Q9BXA9 1300 aa25.01■■□□□ 1.59
PNKP-212ENST00000599454 DYNC1LI2O43237 492 aaPredicted RBP25■■□□□ 1.59
PNKP-212ENST00000599454 FGRP09769 529 aa25■■□□□ 1.59
PNKP-212ENST00000599454 ACRP10323 421 aa25■■□□□ 1.59
PNKP-212ENST00000599454 CYP2C18P33260 490 aa25■■□□□ 1.59
PNKP-212ENST00000599454 CCDC96Q2M329 555 aa25■■□□□ 1.59
PNKP-212ENST00000599454 TAPT1Q6NXT6 567 aa25■■□□□ 1.59
PNKP-212ENST00000599454 TICAM2Q86XR7 235 aa25■■□□□ 1.59
PNKP-212ENST00000599454 GAS2L1Q99501 681 aaPredicted RBP25■■□□□ 1.59
PNKP-212ENST00000599454 RANBP17Q9H2T7 1088 aaKnown RBP25■■□□□ 1.59
PNKP-212ENST00000599454 HIPK3Q9H422 1215 aa25■■□□□ 1.59
PNKP-212ENST00000599454 HELLSQ9NRZ9 838 aa25■■□□□ 1.59
PNKP-212ENST00000599454 ADD3Q9UEY8 706 aaKnown RBP25■■□□□ 1.59
PNKP-212ENST00000599454 SNAP25P60880 206 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 RAB30Q15771 203 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 BTNL9Q6UXG8 535 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 NSMFQ6X4W1 530 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 FBXO16Q8IX29 292 aaPredicted RBP24.99■■□□□ 1.59
PNKP-212ENST00000599454 INCENPQ9NQS7 918 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 PNMA2Q9UL42 364 aa24.99■■□□□ 1.59
PNKP-212ENST00000599454 PBX2P40425 430 aa24.98■■□□□ 1.59
PNKP-212ENST00000599454 PDGFCQ9NRA1 345 aa24.98■■□□□ 1.59
PNKP-212ENST00000599454 MSRAQ9UJ68 235 aa24.98■■□□□ 1.59
PNKP-212ENST00000599454 GRIN2DO15399 1336 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 GRXCR1A8MXD5 290 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 FGBP02675 491 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 TOP1P11387 765 aaKnown RBP24.97■■□□□ 1.59
PNKP-212ENST00000599454 VPS53Q5VIR6 699 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 KIAA1211Q6ZU35 1233 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 EEPD1Q7L9B9 569 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 MTMR7Q9Y216 660 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 NCOR1O75376 2440 aa24.97■■□□□ 1.59
PNKP-212ENST00000599454 SCN10AQ9Y5Y9 1956 aa24.96■■□□□ 1.59
PNKP-212ENST00000599454 DUSP28Q4G0W2 176 aa24.96■■□□□ 1.59
PNKP-212ENST00000599454 SYDE2Q5VT97 1194 aa24.96■■□□□ 1.59
PNKP-212ENST00000599454 RASGRP2Q7LDG7 609 aa24.96■■□□□ 1.59
PNKP-212ENST00000599454 NOC4LQ9BVI4 516 aaKnown RBP24.96■■□□□ 1.59
PNKP-212ENST00000599454 TCP11L1Q9NUJ3 509 aa24.96■■□□□ 1.59
PNKP-212ENST00000599454 ZMYM6O95789 1325 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 BAATQ14032 418 aaPredicted RBP24.95■■□□□ 1.58
PNKP-212ENST00000599454 TJAP1Q5JTD0 557 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 AKNAD1Q5T1N1 836 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 ANKRD45Q5TZF3 282 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 RPUSD2Q8IZ73 545 aaKnown RBP24.95■■□□□ 1.58
PNKP-212ENST00000599454 USP38Q8NB14 1042 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 TOMM22Q9NS69 142 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 POLR3EQ9NVU0 708 aa24.95■■□□□ 1.58
PNKP-212ENST00000599454 B4GALT4O60513 344 aa24.94■■□□□ 1.58
PNKP-212ENST00000599454 ALDH5A1P51649 535 aaPredicted RBP24.94■■□□□ 1.58
PNKP-212ENST00000599454 TTBK2Q6IQ55 1244 aa24.94■■□□□ 1.58
PNKP-212ENST00000599454 TMEM47Q9BQJ4 181 aa24.94■■□□□ 1.58
PNKP-212ENST00000599454 TRPV6Q9H1D0 765 aa24.94■■□□□ 1.58
PNKP-212ENST00000599454 DDX49Q9Y6V7 483 aaKnown RBP24.94■■□□□ 1.58
PNKP-212ENST00000599454 VCANP13611 3396 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms