RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TRERF1Q96PN7 1200 aa17.38■□□□□ 0.37
IRF3-223ENST00000599223 COL25A1Q9BXS0 654 aaPredicted RBP17.38■□□□□ 0.37
IRF3-223ENST00000599223 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
IRF3-223ENST00000599223 CHD7Q9P2D1 2997 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 ORC4O43929 436 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 TIMP1P01033 207 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 FGRP09769 529 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 TTBK2Q6IQ55 1244 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 RCSD1Q6JBY9 416 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 C16orf59Q7L2K0 433 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 FBXO16Q8IX29 292 aaPredicted RBP17.37■□□□□ 0.37
IRF3-223ENST00000599223 PCSK9Q8NBP7 692 aaKnown RBP17.37■□□□□ 0.37
IRF3-223ENST00000599223 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.37■□□□□ 0.371e-10■■□□□ 11.4
IRF3-223ENST00000599223 PDGFCQ9NRA1 345 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 CYP39A1Q9NYL5 469 aa17.37■□□□□ 0.37
IRF3-223ENST00000599223 A0A0U1RQG5 324 aaPredicted RBP17.36■□□□□ 0.37
IRF3-223ENST00000599223 SMPD1P17405 629 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 SLC16A2P36021 539 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 TNFAIP2Q03169 654 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 EEPD1Q7L9B9 569 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 TLK2Q86UE8 772 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 MAFAQ8NHW3 353 aaPredicted RBP17.36■□□□□ 0.37
IRF3-223ENST00000599223 PPP1R12CQ9BZL4 782 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 CCPG1Q9ULG6 757 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 MROH7Q68CQ1 1323 aa17.36■□□□□ 0.37
IRF3-223ENST00000599223 ARVCFO00192 962 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 DNAJB2P25686 324 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
IRF3-223ENST00000599223 ALX1Q15699 326 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 TKFCQ3LXA3 575 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 TAPT1Q6NXT6 567 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
IRF3-223ENST00000599223 SPC25Q9HBM1 224 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 HELLSQ9NRZ9 838 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 GRIN2DO15399 1336 aa17.35■□□□□ 0.37
IRF3-223ENST00000599223 FRMPD2Q68DX3 1309 aaPredicted RBP17.35■□□□□ 0.37
IRF3-223ENST00000599223 MUC3AQ02505 3323 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 NFIBO00712 420 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 CD4P01730 458 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 FGAP02671 866 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 ICAM1P05362 532 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 CSF2RAP15509 400 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 HAND2P61296 217 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
IRF3-223ENST00000599223 FSCN1Q16658 493 aaKnown RBP17.34■□□□□ 0.37
IRF3-223ENST00000599223 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
IRF3-223ENST00000599223 PPP4R3BQ5MIZ7 849 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 NOL8Q76FK4 1167 aaKnown RBP17.34■□□□□ 0.37
IRF3-223ENST00000599223 TBC1D10CQ8IV04 446 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 VTI1AQ96AJ9 217 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
IRF3-223ENST00000599223 ZMYM6O95789 1325 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 ASB14A6NK59 587 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 GRXCR1A8MXD5 290 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 ACRP10323 421 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 HSPD1P10809 573 aaKnown RBP17.33■□□□□ 0.36
IRF3-223ENST00000599223 FOSL2P15408 326 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 CYP2C18P33260 490 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 GRIN2CQ14957 1233 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 TMEM240Q5SV17 173 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 RASIP1Q5U651 963 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 SYDE2Q5VT97 1194 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 BTNL9Q6UXG8 535 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 SLC30A10Q6XR72 485 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 SLC43A3Q8NBI5 491 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 MYO9BQ13459 2157 aa17.33■□□□□ 0.36
IRF3-223ENST00000599223 TTC28Q96AY4 2481 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 NEDD4P46934 1319 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 CCDC171Q6TFL3 1326 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 SCN10AQ9Y5Y9 1956 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 PDHBP11177 359 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
IRF3-223ENST00000599223 PBX2P40425 430 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 PSMC6P62333 389 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 MCMDC2Q4G0Z9 681 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 GPCPD1Q9NPB8 672 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 REV3LO60673 3130 aa17.32■□□□□ 0.36
IRF3-223ENST00000599223 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
IRF3-223ENST00000599223 TANC1Q9C0D5 1861 aa17.31■□□□□ 0.36
IRF3-223ENST00000599223 PPIGQ13427 754 aaKnown RBP eCLIP17.31■□□□□ 0.363e-8■■■■□ 19.9
IRF3-223ENST00000599223 BAATQ14032 418 aaPredicted RBP17.31■□□□□ 0.36
IRF3-223ENST00000599223 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
IRF3-223ENST00000599223 CLEC4DQ8WXI8 215 aa17.31■□□□□ 0.36
IRF3-223ENST00000599223 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 DYNC1LI2O43237 492 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 B4GALT4O60513 344 aa17.3■□□□□ 0.36
IRF3-223ENST00000599223 ALDH5A1P51649 535 aaPredicted RBP17.3■□□□□ 0.36
IRF3-223ENST00000599223 ITGA7Q13683 1181 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 534 ms