RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 FGD4Q96M96 766 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 TCP11L1Q9NUJ3 509 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 TBX21Q9UL17 535 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 Q9Y3F1 56 aa20.58■□□□□ 0.89
HOMER3-210ENST00000599097 B4DLN1 442 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 NOVP48745 357 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 MRPL12P52815 198 aaKnown RBP20.57■□□□□ 0.88
HOMER3-210ENST00000599097 IQSEC1Q6DN90 963 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 NSMFQ6X4W1 530 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
HOMER3-210ENST00000599097 IL17RBQ9NRM6 502 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 CYP39A1Q9NYL5 469 aa20.57■□□□□ 0.88
HOMER3-210ENST00000599097 MCM3APO60318 1980 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 CDK7P50613 346 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 FSCN1Q16658 493 aaKnown RBP20.56■□□□□ 0.88
HOMER3-210ENST00000599097 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 BTNL9Q6UXG8 535 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 TTC14Q96N46 770 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 CDX2Q99626 313 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-210ENST00000599097 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
HOMER3-210ENST00000599097 RANBP17Q9H2T7 1088 aaKnown RBP20.56■□□□□ 0.88
HOMER3-210ENST00000599097 RAD50Q92878 1312 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 MYADML2A6NDP7 307 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 FOXP2O15409 715 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 ITGB8P26012 769 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 BRDTQ58F21 947 aaPredicted RBP20.55■□□□□ 0.88
HOMER3-210ENST00000599097 RRP12Q5JTH9 1297 aaKnown RBP20.55■□□□□ 0.88
HOMER3-210ENST00000599097 SYDE2Q5VT97 1194 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 MFSD6Q6ZSS7 791 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 RWDD1Q9H446 243 aaPredicted RBP20.55■□□□□ 0.88
HOMER3-210ENST00000599097 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
HOMER3-210ENST00000599097 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 SOWAHBA6NEL2 793 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 NMT2O60551 498 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 FGAP02671 866 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 FOSL2P15408 326 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 VPS53Q5VIR6 699 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 MAFAQ8NHW3 353 aaPredicted RBP20.54■□□□□ 0.88
HOMER3-210ENST00000599097 ESR2Q92731 530 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 CRBNQ96SW2 442 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 MAF1Q9H063 256 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 GNEQ9Y223 722 aaKnown RBP20.54■□□□□ 0.88
HOMER3-210ENST00000599097 LAMA2P24043 3122 aaKnown RBP20.54■□□□□ 0.88
HOMER3-210ENST00000599097 A0A0C4DFX4 3053 aa20.54■□□□□ 0.88
HOMER3-210ENST00000599097 HIP1O00291 1037 aa20.53■□□□□ 0.88
HOMER3-210ENST00000599097 ADCY6O43306 1168 aa20.53■□□□□ 0.88
HOMER3-210ENST00000599097 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
HOMER3-210ENST00000599097 GPATCH4Q5T3I0 446 aaKnown RBP20.53■□□□□ 0.88
HOMER3-210ENST00000599097 A0A0D9SFI3 127 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 DNAJB2P25686 324 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 CPT1AP50416 773 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 MUM1L1Q5H9M0 696 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 AKNAD1Q5T1N1 836 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 MORC4Q8TE76 937 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 TMEM47Q9BQJ4 181 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 POLR3EQ9NVU0 708 aa20.52■□□□□ 0.88
HOMER3-210ENST00000599097 WDR19Q8NEZ3 1342 aa20.52■□□□□ 0.87
HOMER3-210ENST00000599097 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 DYNC1LI2O43237 492 aaPredicted RBP20.51■□□□□ 0.87
HOMER3-210ENST00000599097 EPHB4P54760 987 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 ITGA7Q13683 1181 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 CXCL17Q6UXB2 119 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 IQCA1Q86XH1 822 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 FBXO16Q8IX29 292 aaPredicted RBP20.51■□□□□ 0.87
HOMER3-210ENST00000599097 SLC43A3Q8NBI5 491 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 RILPL2Q969X0 211 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 CHMP4CQ96CF2 233 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 FAM227BQ96M60 508 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 HIPK3Q9H422 1215 aa20.51■□□□□ 0.87
HOMER3-210ENST00000599097 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 NKRFO15226 690 aaKnown RBP eCLIP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 SUPT20HL2P0C7V6 817 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 SMPD1P17405 629 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 ALDH5A1P51649 535 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 BEX3Q00994 111 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 DUSP28Q4G0W2 176 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 DNERQ8NFT8 737 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 PPP1R12CQ9BZL4 782 aa20.5■□□□□ 0.87
HOMER3-210ENST00000599097 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-210ENST00000599097 CTAGE5O15320 804 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 CD4P01730 458 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 PDHBP11177 359 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 CSF2RAP15509 400 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 PDE4DQ08499 809 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 ZNF543Q08ER8 600 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 BAATQ14032 418 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-210ENST00000599097 RAB30Q15771 203 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 RNF207Q6ZRF8 634 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 EEPD1Q7L9B9 569 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 DGKHQ86XP1 1220 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 MYLIPQ8WY64 445 aa20.49■□□□□ 0.87
HOMER3-210ENST00000599097 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms