RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 SNHG28P0DPA3 235 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 ALAS1P13196 640 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 SDSP20132 328 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 C9orf50Q5SZB4 431 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 RNF41Q9H4P4 317 aaPredicted RBP17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 GNEQ9Y223 722 aaKnown RBP17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 Q9Y3F1 56 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 LRRC37A2A6NM11 1700 aa17.98■□□□□ 0.47
SPTBN4-213ENST00000598775 RAG1P15918 1043 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 MFSD6Q6ZSS7 791 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 RASGRP2Q7LDG7 609 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 SLC17A8Q8NDX2 589 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 TMEM39AQ9NV64 488 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 TBX21Q9UL17 535 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 CCPG1Q9ULG6 757 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 CDH23Q9H251 3354 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 UNC80Q8N2C7 3258 aa17.97■□□□□ 0.47
SPTBN4-213ENST00000598775 LCTP09848 1927 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 IGHDP01880 384 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 PDHBP11177 359 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 CCDC96Q2M329 555 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 GNASQ5JWF2 1037 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 SYDE2Q5VT97 1194 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 IQSEC1Q6DN90 963 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 CCDC174Q6PII3 467 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 RILPL2Q969X0 211 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 SEZ6LQ9BYH1 1024 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
SPTBN4-213ENST00000598775 A0A0U1RQG5 324 aaPredicted RBP17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 ARVCFO00192 962 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 HIP1O00291 1037 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 CABYRO75952 493 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 TIMP1P01033 207 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 ZNF543Q08ER8 600 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 RRP12Q5JTH9 1297 aaKnown RBP17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 TTBK2Q6IQ55 1244 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 TAPT1Q6NXT6 567 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 DGKHQ86XP1 1220 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 ESR2Q92731 530 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 MAF1Q9H063 256 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 VTA1Q9NP79 307 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
SPTBN4-213ENST00000598775 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 SLC16A2P36021 539 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 SNAP25P60880 206 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 HAND2P61296 217 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 IRX5P78411 483 aaPredicted RBP17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 FPGSQ05932 587 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 B4GALNT3Q6L9W6 998 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 TBC1D10CQ8IV04 446 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 ANKS1AQ92625 1134 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 GUCD1Q96NT3 240 aa17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
SPTBN4-213ENST00000598775 TMEM265A0A087WTH1 108 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 ZNF213O14771 459 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 CD4P01730 458 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 EPHB4P54760 987 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 GPATCH4Q5T3I0 446 aaKnown RBP17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 ZNF697Q5TEC3 545 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 TLK2Q86UE8 772 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 CHMP4CQ96CF2 233 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 DSCC1Q9BVC3 393 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 EYSQ5T1H1 3165 aa17.93■□□□□ 0.46
SPTBN4-213ENST00000598775 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 SMPD1P17405 629 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 BAATQ14032 418 aaPredicted RBP17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 FSCN1Q16658 493 aaKnown RBP17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 NSMFQ6X4W1 530 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 EXOC6Q8TAG9 804 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 CLEC4DQ8WXI8 215 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 GPCPD1Q9NPB8 672 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 MTMR7Q9Y216 660 aa17.92■□□□□ 0.46
SPTBN4-213ENST00000598775 NFIBO00712 420 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 ZEB2O60315 1214 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 ALDH5A1P51649 535 aaPredicted RBP17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 CWC27Q6UX04 472 aaKnown RBP17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 IQCA1Q86XH1 822 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 RGS22Q8NE09 1264 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 RNPC3Q96LT9 517 aaKnown RBP17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 AP5M1Q9H0R1 490 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 SEMA6BQ9H3T3 888 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 PDGFCQ9NRA1 345 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 NEDD4P46934 1319 aa17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 FRMPD2Q68DX3 1309 aaPredicted RBP17.91■□□□□ 0.46
SPTBN4-213ENST00000598775 TLR3O15455 904 aaKnown RBP17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 EDNRBP24530 442 aa17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 BEX3Q00994 111 aa17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 NOL8Q76FK4 1167 aaKnown RBP17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 FBXO16Q8IX29 292 aaPredicted RBP17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 DNERQ8NFT8 737 aa17.9■□□□□ 0.46
SPTBN4-213ENST00000598775 VTI1AQ96AJ9 217 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms