RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
SSBP4-204ENST00000597724 DHX16O60231 1041 aaKnown RBP19.49■□□□□ 0.71
SSBP4-204ENST00000597724 MSCO60682 206 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 FARP2O94887 1054 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-204ENST00000597724 HSPA4P34932 840 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 EXOSC10Q01780 885 aaKnown RBP19.49■□□□□ 0.71
SSBP4-204ENST00000597724 NSMFQ6X4W1 530 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 ZNF654Q8IZM8 581 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 CLEC4DQ8WXI8 215 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 MAP3K14Q99558 947 aa19.49■□□□□ 0.71
SSBP4-204ENST00000597724 SOWAHBA6NEL2 793 aa19.48■□□□□ 0.71
SSBP4-204ENST00000597724 SNAI1O95863 264 aaPredicted RBP19.48■□□□□ 0.71
SSBP4-204ENST00000597724 MNX1P50219 401 aaPredicted RBP19.48■□□□□ 0.71
SSBP4-204ENST00000597724 QRICH1Q2TAL8 776 aa19.48■□□□□ 0.71
SSBP4-204ENST00000597724 USH1GQ495M9 461 aa19.48■□□□□ 0.71
SSBP4-204ENST00000597724 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
SSBP4-204ENST00000597724 MTMR8Q96EF0 704 aa19.48■□□□□ 0.71
SSBP4-204ENST00000597724 LRRC2Q9BYS8 371 aa19.48■□□□□ 0.71
SSBP4-204ENST00000597724 CCDC69A6NI79 296 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 DDAH1O94760 285 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 ZNF865P0CJ78 1059 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-204ENST00000597724 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
SSBP4-204ENST00000597724 SLC35G1Q2M3R5 365 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 NFXL1Q6ZNB6 911 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 SGMS1Q86VZ5 419 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 FBXO11Q86XK2 927 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 NUP133Q8WUM0 1156 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
SSBP4-204ENST00000597724 RIOX1Q9H6W3 641 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 CNPY2Q9Y2B0 182 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 SNX14Q9Y5W7 946 aa19.47■□□□□ 0.71
SSBP4-204ENST00000597724 HMGB1P09429 215 aaKnown RBP19.46■□□□□ 0.71
SSBP4-204ENST00000597724 ARMCX2Q7L311 632 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 CCDC144CPQ8IYA2 1237 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 RGS22Q8NE09 1264 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 MYL10Q9BUA6 226 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-204ENST00000597724 ASTN1O14525 1302 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 ABCB11O95342 1321 aa19.46■□□□□ 0.71
SSBP4-204ENST00000597724 MYH6P13533 1939 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 PTPDC1A2A3K4 754 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 ASB14A6NK59 587 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 ZBTB5O15062 677 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 CYTH3O43739 400 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 RNF207Q6ZRF8 634 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 NECAB2Q7Z6G3 386 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-204ENST00000597724 DIS3LQ8TF46 1054 aaKnown RBP19.45■□□□□ 0.7
SSBP4-204ENST00000597724 PURBQ96QR8 312 aaKnown RBP19.45■□□□□ 0.7
SSBP4-204ENST00000597724 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 MAF1Q9H063 256 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 ABHD16BQ9H3Z7 469 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 FRMPD3Q5JV73 1810 aa19.45■□□□□ 0.7
SSBP4-204ENST00000597724 MCM3APO60318 1980 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 BAZ2BQ9UIF8 2168 aaKnown RBP19.44■□□□□ 0.7
SSBP4-204ENST00000597724 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-204ENST00000597724 CALM1P0DP23 149 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 CALM2P0DP24 149 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 CALM3P0DP25 149 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 KIF5BP33176 963 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 RPS6P62753 249 aaKnown RBP19.44■□□□□ 0.7
SSBP4-204ENST00000597724 ACVR2BQ13705 512 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 ANO1Q5XXA6 986 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 SLC30A10Q6XR72 485 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 TCEANC2Q96MN5 208 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 PIGSQ96S52 555 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 AMNQ9BXJ7 453 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 MRPL11Q9Y3B7 192 aaKnown RBP19.44■□□□□ 0.7
SSBP4-204ENST00000597724 SLC12A7Q9Y666 1083 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 LCTP09848 1927 aa19.44■□□□□ 0.7
SSBP4-204ENST00000597724 CALML3P27482 149 aa19.43■□□□□ 0.7
SSBP4-204ENST00000597724 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
SSBP4-204ENST00000597724 JAKMIP1Q96N16 626 aaKnown RBP19.43■□□□□ 0.7
SSBP4-204ENST00000597724 HTATIP2Q9BUP3 242 aa19.43■□□□□ 0.7
SSBP4-204ENST00000597724 KATNBL1Q9H079 304 aa19.43■□□□□ 0.7
SSBP4-204ENST00000597724 ADD3Q9UEY8 706 aaKnown RBP19.43■□□□□ 0.7
SSBP4-204ENST00000597724 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-204ENST00000597724 PNMA6FA0A0J9YX94 578 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 AKR1A1P14550 325 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 CPA1P15085 419 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 RXRAP19793 462 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 GNAQP50148 359 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 FANCBQ8NB91 859 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 MORC4Q8TE76 937 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 TBC1D5Q92609 795 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 LZTS2Q9BRK4 669 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 SPZ1Q9BXG8 430 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 C11orf49Q9H6J7 331 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 FAM184BQ9ULE4 1060 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 PCDHA1Q9Y5I3 950 aa19.42■□□□□ 0.7
SSBP4-204ENST00000597724 LOC102724159A0A0B4J2E5 919 aa19.41■□□□□ 0.7
SSBP4-204ENST00000597724 RARBP10826 455 aa19.41■□□□□ 0.7
SSBP4-204ENST00000597724 COL6A1P12109 1028 aa19.41■□□□□ 0.7
SSBP4-204ENST00000597724 PSMA5P28066 241 aa19.41■□□□□ 0.7
SSBP4-204ENST00000597724 ALDH5A1P51649 535 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-204ENST00000597724 TRAF1Q13077 416 aa19.41■□□□□ 0.7
SSBP4-204ENST00000597724 PWP2Q15269 919 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms