RNA–Protein interactions for RNA: ENST00000597168.1

SH2D3A-205, Transcript of SH2 domain containing 3A, humanhuman

TSL 5

Gene SH2D3A, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-205ENST00000597168 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
SH2D3A-205ENST00000597168 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
SH2D3A-205ENST00000597168 ABCB11O95342 1321 aa13.13□□□□□ -0.31
SH2D3A-205ENST00000597168 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 OAZ1P54368 228 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 TMEM132BQ14DG7 1078 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 LBX2Q6XYB7 198 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 CUL5Q93034 780 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
SH2D3A-205ENST00000597168 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 MEIS2O14770 477 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 OPLAHO14841 1288 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 SLC10A3P09131 477 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 ALAS1P13196 640 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 TOB1P50616 345 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 KRT85P78386 507 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 ANKRD23Q86SG2 305 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 CFAP45Q9UL16 551 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 TCHHQ07283 1943 aa13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 COL11A1P12107 1806 aaPredicted RBP13.11□□□□□ -0.31
SH2D3A-205ENST00000597168 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 PDHXO00330 501 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 NCLP19338 710 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 MCM4P33991 863 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 STAT3P40763 770 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 HERVK_113P62684 666 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 NFKBIBQ15653 356 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 UBE2SQ16763 222 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 RILPL1Q5EBL4 403 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 REXO1Q8N1G1 1221 aaKnown RBP13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 MB21D1Q8N884 522 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 CLEC4DQ8WXI8 215 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 PTPN18Q99952 460 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 BTBD7Q9P203 1132 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
SH2D3A-205ENST00000597168 MYH15Q9Y2K3 1946 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 FAM155AB1AL88 458 aaPredicted RBP13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 CNMDO75829 334 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 CFBP00751 764 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 CEBPZQ03701 1054 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 MUM1L1Q5H9M0 696 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 TEX2Q8IWB9 1127 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 GDPD2Q9HCC8 539 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 RTEL1Q9NZ71 1219 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 RBPJLQ9UBG7 517 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-205ENST00000597168 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 FIBPO43427 364 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 PEX10O60683 326 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 POLR2MP0CAP2 368 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 CYP2C8P10632 490 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 ATP2B1P20020 1258 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 APLP1P51693 650 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 INHBEP58166 350 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 PLS1Q14651 629 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 RIOX2Q8IUF8 465 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 SAMD3Q8N6K7 520 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.32
SH2D3A-205ENST00000597168 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms