RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 LDLRAD1Q5T700 205 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 ADALQ6DHV7 355 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 JMYQ8N9B5 988 aa17.33■□□□□ 0.37
VRK3-207ENST00000594092 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.37
VRK3-207ENST00000594092 SPDYE5A6NIY4 337 aa17.33■□□□□ 0.36
VRK3-207ENST00000594092 ZNF408Q9H9D4 720 aa17.33■□□□□ 0.36
VRK3-207ENST00000594092 MORC2Q9Y6X9 1032 aaPredicted RBP17.33■□□□□ 0.36
VRK3-207ENST00000594092 SMCHD1A6NHR9 2005 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 PTPRFP10586 1907 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 A0A1W2PQ27 194 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 A0A1W2PQ64 194 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 A0A1W2PQD8 194 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 OPLAHO14841 1288 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 BMP15O95972 392 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 ZNF536O15090 1300 aa17.32■□□□□ 0.36
VRK3-207ENST00000594092 PARP14Q460N5 1801 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 IRF6O14896 467 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 USP17L6PQ6QN14 398 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 CCAR1Q8IX12 1150 aaKnown RBP17.31■□□□□ 0.36
VRK3-207ENST00000594092 TBCKQ8TEA7 893 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 RLFQ13129 1914 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 SYCE3A1L190 88 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 FSD2A1L4K1 749 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 MEIS2O14770 477 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 ICAM1P05362 532 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 MCM7P33993 719 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 PPIL2Q13356 520 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 L1TD1Q5T7N2 865 aaKnown RBP17.31■□□□□ 0.36
VRK3-207ENST00000594092 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 KRI1Q8N9T8 703 aaKnown RBP17.31■□□□□ 0.36
VRK3-207ENST00000594092 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 GOLPH3LQ9H4A5 285 aa17.31■□□□□ 0.36
VRK3-207ENST00000594092 FBXO2Q9UK22 296 aaPredicted RBP17.31■□□□□ 0.36
VRK3-207ENST00000594092 A0A0G2JLL6 359 aaPredicted RBP17.3■□□□□ 0.36
VRK3-207ENST00000594092 CXCL11O14625 94 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 CUTAO60888 179 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 PTPREP23469 700 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 PRRT2Q7Z6L0 340 aaPredicted RBP17.3■□□□□ 0.36
VRK3-207ENST00000594092 NEK8Q86SG6 692 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 MRPS27Q92552 414 aaKnown RBP17.3■□□□□ 0.36
VRK3-207ENST00000594092 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 CLIC6Q96NY7 704 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 CCPG1Q9ULG6 757 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 MRPL11Q9Y3B7 192 aaKnown RBP17.3■□□□□ 0.36
VRK3-207ENST00000594092 ABCB11O95342 1321 aa17.3■□□□□ 0.36
VRK3-207ENST00000594092 VWA5AO00534 786 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 ZBED4O75132 1171 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 FDX1P10109 184 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 DSG3P32926 999 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 ATP2C1P98194 919 aaPredicted RBP17.29■□□□□ 0.36
VRK3-207ENST00000594092 PTGDRQ13258 359 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 C4orf32Q8N8J7 132 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 WNK4Q96J92 1243 aa17.29■□□□□ 0.36
VRK3-207ENST00000594092 SRPRBQ9Y5M8 271 aaKnown RBP17.29■□□□□ 0.36
VRK3-207ENST00000594092 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 EDIL3O43854 480 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 NR1I2O75469 434 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 CMA1P23946 247 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 GRIN1Q05586 938 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 COG2Q14746 738 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 TREML2Q5T2D2 321 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 PROCA1Q8NCQ7 364 aaPredicted RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 GBA2Q9HCG7 927 aaPredicted RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 DDX19AQ9NUU7 478 aaKnown RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 DACT1Q9NYF0 836 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 ADAMTS5Q9UNA0 930 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 PIK3CDO00329 1044 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 FKBP1BP68106 108 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 SHC4Q6S5L8 630 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 CCDC73Q6ZRK6 1079 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 TEX2Q8IWB9 1127 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 CPXCR1Q8N123 301 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 SLC10A4Q96EP9 437 aa17.28■□□□□ 0.36
VRK3-207ENST00000594092 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
VRK3-207ENST00000594092 MYPNQ86TC9 1320 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 A0A1B0GVL5 298 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms