RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 PBX2P40425 430 aa20.73■□□□□ 0.91
RETREG3-212ENST00000593251 MUM1L1Q5H9M0 696 aa20.73■□□□□ 0.91
RETREG3-212ENST00000593251 ZNF576Q9H609 170 aa20.73■□□□□ 0.91
RETREG3-212ENST00000593251 IL17RBQ9NRM6 502 aa20.73■□□□□ 0.91
RETREG3-212ENST00000593251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
RETREG3-212ENST00000593251 SPTBN5Q9NRC6 3674 aaKnown RBP20.73■□□□□ 0.91
RETREG3-212ENST00000593251 MYO9BQ13459 2157 aa20.73■□□□□ 0.91
RETREG3-212ENST00000593251 TSPY2A6NKD2 308 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 TLR3O15455 904 aaKnown RBP20.72■□□□□ 0.91
RETREG3-212ENST00000593251 CYP2C18P33260 490 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 CXCL17Q6UXB2 119 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 ZNF365Q70YC5 407 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 TMEM199Q8N511 208 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 USP38Q8NB14 1042 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 TIFAQ96CG3 184 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 PDGFCQ9NRA1 345 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
RETREG3-212ENST00000593251 ASB14A6NK59 587 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 MX1P20591 662 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 TKFCQ3LXA3 575 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 TMEM63BQ5T3F8 832 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 RCSD1Q6JBY9 416 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 EEPD1Q7L9B9 569 aa20.71■□□□□ 0.91
RETREG3-212ENST00000593251 PURBQ96QR8 312 aaKnown RBP20.71■□□□□ 0.91
RETREG3-212ENST00000593251 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
RETREG3-212ENST00000593251 DYNC1LI2O43237 492 aaPredicted RBP20.7■□□□□ 0.9
RETREG3-212ENST00000593251 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
RETREG3-212ENST00000593251 CD4P01730 458 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 SMPD1P17405 629 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 NKX3-2P78367 333 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 VPS53Q5VIR6 699 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 FBXO16Q8IX29 292 aaPredicted RBP20.7■□□□□ 0.9
RETREG3-212ENST00000593251 PBX4Q9BYU1 374 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 CYP39A1Q9NYL5 469 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 UMODL1Q5DID0 1318 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 CHD9Q3L8U1 2897 aa20.7■□□□□ 0.9
RETREG3-212ENST00000593251 PLA2G6O60733 806 aa20.69■□□□□ 0.9
RETREG3-212ENST00000593251 FSCN1Q16658 493 aaKnown RBP20.69■□□□□ 0.9
RETREG3-212ENST00000593251 RASIP1Q5U651 963 aa20.69■□□□□ 0.9
RETREG3-212ENST00000593251 NSMFQ6X4W1 530 aa20.69■□□□□ 0.9
RETREG3-212ENST00000593251 AP5M1Q9H0R1 490 aa20.69■□□□□ 0.9
RETREG3-212ENST00000593251 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
RETREG3-212ENST00000593251 ITGA7Q13683 1181 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 CCDC96Q2M329 555 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 TTBK2Q6IQ55 1244 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 TAPT1Q6NXT6 567 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
RETREG3-212ENST00000593251 SLC43A3Q8NBI5 491 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 IL23AQ9NPF7 189 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 GRIN2DO15399 1336 aa20.68■□□□□ 0.9
RETREG3-212ENST00000593251 SLC16A2P36021 539 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 PSMC6P62333 389 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 PPP4R3BQ5MIZ7 849 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 PPM1EQ8WY54 764 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 TRPV6Q9H1D0 765 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 HIPK3Q9H422 1215 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 PRDM12Q9H4Q4 367 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 PRDM6Q9NQX0 595 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 CXXC1Q9P0U4 656 aaPredicted RBP20.67■□□□□ 0.9
RETREG3-212ENST00000593251 SALL3Q9BXA9 1300 aa20.67■□□□□ 0.9
RETREG3-212ENST00000593251 SCN5AQ14524 2016 aa20.66■□□□□ 0.9
RETREG3-212ENST00000593251 CABYRO75952 493 aa20.66■□□□□ 0.9
RETREG3-212ENST00000593251 CCL23P55773 120 aa20.66■□□□□ 0.9
RETREG3-212ENST00000593251 KIAA1211Q6ZU35 1233 aa20.66■□□□□ 0.9
RETREG3-212ENST00000593251 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
RETREG3-212ENST00000593251 FRMPD2Q68DX3 1309 aaPredicted RBP20.65■□□□□ 0.9
RETREG3-212ENST00000593251 B4GALT4O60513 344 aa20.65■□□□□ 0.9
RETREG3-212ENST00000593251 ICAM1P05362 532 aa20.65■□□□□ 0.9
RETREG3-212ENST00000593251 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
RETREG3-212ENST00000593251 IQSEC1Q6DN90 963 aa20.65■□□□□ 0.9
RETREG3-212ENST00000593251 DCAF4Q8WV16 495 aa20.65■□□□□ 0.9
RETREG3-212ENST00000593251 GAS2L1Q99501 681 aaPredicted RBP20.65■□□□□ 0.9
RETREG3-212ENST00000593251 RANBP17Q9H2T7 1088 aaKnown RBP20.65■□□□□ 0.9
RETREG3-212ENST00000593251 ANAPC4Q9UJX5 808 aa20.65■□□□□ 0.9
RETREG3-212ENST00000593251 ORC4O43929 436 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 ZEB2O60315 1214 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 FGBP02675 491 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 NOVP48745 357 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 BAATQ14032 418 aaPredicted RBP20.64■□□□□ 0.89
RETREG3-212ENST00000593251 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 OTOP2Q7RTS6 562 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 HERVK_113Q902F9 699 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 NOC4LQ9BVI4 516 aaKnown RBP20.64■□□□□ 0.89
RETREG3-212ENST00000593251 NKX2-4Q9H2Z4 354 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 VTA1Q9NP79 307 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.89
RETREG3-212ENST00000593251 CHD7Q9P2D1 2997 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 NFIBO00712 420 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 ALDH5A1P51649 535 aaPredicted RBP20.63■□□□□ 0.89
RETREG3-212ENST00000593251 SYDE2Q5VT97 1194 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 FAM227BQ96M60 508 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 TMEM47Q9BQJ4 181 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 WNT8AQ9H1J5 351 aa20.63■□□□□ 0.89
RETREG3-212ENST00000593251 A0A0D9SFI3 127 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 PTPDC1A2A3K4 754 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 MORC4Q8TE76 937 aa20.62■□□□□ 0.89
RETREG3-212ENST00000593251 SYMPKQ92797 1274 aaKnown RBP20.62■□□□□ 0.89
RETREG3-212ENST00000593251 SCLYQ96I15 445 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms