RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 GBA2Q9HCG7 927 aaPredicted RBP20.67■□□□□ 0.9
CTDP1-205ENST00000590599 VCAM1P19320 739 aa20.66■□□□□ 0.9
CTDP1-205ENST00000590599 NONOQ15233 471 aaKnown RBP eCLIP20.66■□□□□ 0.9
CTDP1-205ENST00000590599 SAMD1Q6SPF0 538 aaPredicted RBP20.66■□□□□ 0.9
CTDP1-205ENST00000590599 FSIP1Q8NA03 581 aa20.66■□□□□ 0.9
CTDP1-205ENST00000590599 MRPS27Q92552 414 aaKnown RBP20.66■□□□□ 0.9
CTDP1-205ENST00000590599 TANGO6Q9C0B7 1094 aa20.66■□□□□ 0.9
CTDP1-205ENST00000590599 PSTPIP2Q9H939 334 aa20.66■□□□□ 0.9
CTDP1-205ENST00000590599 EMILIN3Q9NT22 766 aa20.66■□□□□ 0.9
CTDP1-205ENST00000590599 BIN2Q9UBW5 565 aaPredicted RBP20.66■□□□□ 0.9
CTDP1-205ENST00000590599 USH1GQ495M9 461 aa20.65■□□□□ 0.9
CTDP1-205ENST00000590599 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
CTDP1-205ENST00000590599 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.65■□□□□ 0.9
CTDP1-205ENST00000590599 KRI1Q8N9T8 703 aaKnown RBP20.65■□□□□ 0.9
CTDP1-205ENST00000590599 RANBP17Q9H2T7 1088 aaKnown RBP20.65■□□□□ 0.9
CTDP1-205ENST00000590599 FBXO28Q9NVF7 368 aa20.65■□□□□ 0.9
CTDP1-205ENST00000590599 SNCAIPQ9Y6H5 919 aa20.65■□□□□ 0.9
CTDP1-205ENST00000590599 THSD7BQ9C0I4 1608 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 C19orf81C9J6K1 198 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 DGKZQ13574 1117 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 TTLL12Q14166 644 aaPredicted RBP20.64■□□□□ 0.9
CTDP1-205ENST00000590599 ZNF174Q15697 407 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 INF2Q27J81 1249 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 AXDND1Q5T1B0 1012 aaPredicted RBP20.64■□□□□ 0.9
CTDP1-205ENST00000590599 SLF1Q9BQI6 1058 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 DDX19AQ9NUU7 478 aaKnown RBP20.64■□□□□ 0.9
CTDP1-205ENST00000590599 DACT1Q9NYF0 836 aa20.64■□□□□ 0.9
CTDP1-205ENST00000590599 WNT7AO00755 349 aa20.64■□□□□ 0.89
CTDP1-205ENST00000590599 CUTAO60888 179 aa20.64■□□□□ 0.89
CTDP1-205ENST00000590599 CCDC174Q6PII3 467 aa20.64■□□□□ 0.89
CTDP1-205ENST00000590599 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
CTDP1-205ENST00000590599 MORC2Q9Y6X9 1032 aaPredicted RBP20.64■□□□□ 0.89
CTDP1-205ENST00000590599 MCM7P33993 719 aa20.63■□□□□ 0.89
CTDP1-205ENST00000590599 HMGCS2P54868 508 aa20.63■□□□□ 0.89
CTDP1-205ENST00000590599 PRPF38AQ8NAV1 312 aaKnown RBP20.63■□□□□ 0.89
CTDP1-205ENST00000590599 GOLPH3LQ9H4A5 285 aa20.63■□□□□ 0.89
CTDP1-205ENST00000590599 RPAP3Q9H6T3 665 aaPredicted RBP20.63■□□□□ 0.89
CTDP1-205ENST00000590599 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
CTDP1-205ENST00000590599 FOXN1O15353 648 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 NR1I2O75469 434 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 FLOT1O75955 427 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 FAM160A1Q05DH4 1040 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 UBE2SQ16763 222 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 C2orf69Q8N8R5 385 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 C12orf42Q96LP6 360 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 TMOD4Q9NZQ9 345 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 FBXO2Q9UK22 296 aaPredicted RBP20.62■□□□□ 0.89
CTDP1-205ENST00000590599 AFG3L2Q9Y4W6 797 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 SYCE3A1L190 88 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 PTPREP23469 700 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 CMA1P23946 247 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 ANKRD13AQ8IZ07 590 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 TBCKQ8TEA7 893 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 NUP62CLQ9H1M0 184 aa20.62■□□□□ 0.89
CTDP1-205ENST00000590599 LETM1O95202 739 aaPredicted RBP20.61■□□□□ 0.89
CTDP1-205ENST00000590599 CLK2P49760 499 aaKnown RBP20.61■□□□□ 0.89
CTDP1-205ENST00000590599 ZNF445P59923 1031 aa20.61■□□□□ 0.89
CTDP1-205ENST00000590599 ATP2C1P98194 919 aaPredicted RBP20.61■□□□□ 0.89
CTDP1-205ENST00000590599 PTGDRQ13258 359 aa20.61■□□□□ 0.89
CTDP1-205ENST00000590599 COL13A1Q5TAT6 717 aaPredicted RBP20.61■□□□□ 0.89
CTDP1-205ENST00000590599 FERMT2Q96AC1 680 aa20.61■□□□□ 0.89
CTDP1-205ENST00000590599 CLIC6Q96NY7 704 aa20.61■□□□□ 0.89
CTDP1-205ENST00000590599 SRPRBQ9Y5M8 271 aaKnown RBP20.61■□□□□ 0.89
CTDP1-205ENST00000590599 A0A1B0GVL5 298 aa20.6■□□□□ 0.89
CTDP1-205ENST00000590599 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
CTDP1-205ENST00000590599 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
CTDP1-205ENST00000590599 MRVI1Q9Y6F6 885 aa20.6■□□□□ 0.89
CTDP1-205ENST00000590599 PARP14Q460N5 1801 aa20.6■□□□□ 0.89
CTDP1-205ENST00000590599 FAM155AB1AL88 458 aaPredicted RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 LETM2Q2VYF4 491 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 MCTP2Q6DN12 878 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 SHC4Q6S5L8 630 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 CLSTN2Q9H4D0 955 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 ELP3Q9H9T3 547 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 TSKSQ9UJT2 592 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 PPP1R9AQ9ULJ8 1098 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L15C9J2P7 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L13C9JLJ4 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L11C9JVI0 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L18D6R9N7 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L22D6RA61 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L17D6RBQ6 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L19D6RCP7 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L20D6RJB6 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 CCNT1O60563 726 aaKnown RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 PFKFB1P16118 471 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 TAL1P17542 331 aaPredicted RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 NDUFA8P51970 172 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L24Q0WX57 530 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 AP3B2Q13367 1082 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 MAP3K11Q16584 847 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 RESP18Q5W5W9 173 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 USP17L6PQ6QN14 398 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 ZNF579Q8NAF0 562 aaKnown RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 TNMDQ9H2S6 317 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 WBP1LQ9NX94 342 aa20.59■□□□□ 0.89
CTDP1-205ENST00000590599 MRPL11Q9Y3B7 192 aaKnown RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 CTDP1Q9Y5B0 961 aaPredicted RBP20.59■□□□□ 0.89
CTDP1-205ENST00000590599 ABCB11O95342 1321 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms