RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 FOXP1Q9H334 677 aaPredicted RBP20.28■□□□□ 0.84
TMED1-205ENST00000589638 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
TMED1-205ENST00000589638 MRPL11Q9Y3B7 192 aaKnown RBP20.28■□□□□ 0.84
TMED1-205ENST00000589638 FAM155AB1AL88 458 aaPredicted RBP20.27■□□□□ 0.84
TMED1-205ENST00000589638 UBE2SQ16763 222 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 NOM1Q5C9Z4 860 aaKnown RBP20.27■□□□□ 0.84
TMED1-205ENST00000589638 SNRNP48Q6IEG0 339 aaKnown RBP20.27■□□□□ 0.84
TMED1-205ENST00000589638 NOSTRINQ8IVI9 506 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 BICD2Q8TD16 824 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 HHIPL1Q96JK4 782 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 PTPN18Q99952 460 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 PSTPIP2Q9H939 334 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 RIC8AQ9NPQ8 531 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 CREBZFQ9NS37 354 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 BIN2Q9UBW5 565 aaPredicted RBP20.27■□□□□ 0.84
TMED1-205ENST00000589638 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.84
TMED1-205ENST00000589638 TESPA1A2RU30 521 aaPredicted RBP20.26■□□□□ 0.83
TMED1-205ENST00000589638 FAM205CA6NFA0 338 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 U2AF2P26368 475 aaKnown RBP eCLIP20.26■□□□□ 0.83
TMED1-205ENST00000589638 MRPL12P52815 198 aaKnown RBP20.26■□□□□ 0.83
TMED1-205ENST00000589638 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 LBX2Q6XYB7 198 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 BRAPQ7Z569 592 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 TMEM260Q9NX78 707 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 ZNF214Q9UL59 606 aaPredicted RBP20.26■□□□□ 0.83
TMED1-205ENST00000589638 PCDHA6Q9UN73 950 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 SLC45A1Q9Y2W3 748 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 PCDHA8Q9Y5H6 950 aa20.26■□□□□ 0.83
TMED1-205ENST00000589638 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
TMED1-205ENST00000589638 OAZ1P54368 228 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 DNM1Q05193 864 aaKnown RBP20.25■□□□□ 0.83
TMED1-205ENST00000589638 EARS2Q5JPH6 523 aaKnown RBP20.25■□□□□ 0.83
TMED1-205ENST00000589638 POTEEQ6S8J3 1075 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 PIK3AP1Q6ZUJ8 805 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 REXO1Q8N1G1 1221 aaKnown RBP20.25■□□□□ 0.83
TMED1-205ENST00000589638 MB21D1Q8N884 522 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 SMCR8Q8TEV9 937 aaPredicted RBP20.25■□□□□ 0.83
TMED1-205ENST00000589638 TNFRSF25Q93038 417 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 TEX13BQ9BXU2 312 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
TMED1-205ENST00000589638 CCDC194A0A1B0GVG4 234 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 M0R2N6 131 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 OPLAHO14841 1288 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 CNMDO75829 334 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 BAG4O95429 457 aaKnown RBP20.24■□□□□ 0.83
TMED1-205ENST00000589638 STAT3P40763 770 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 DEFB115Q30KQ5 88 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 MYSM1Q5VVJ2 828 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 USP17L6PQ6QN14 398 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 PGBD1Q96JS3 809 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 TRERF1Q96PN7 1200 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 ZIC5Q96T25 663 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 RIPK3Q9Y572 518 aa20.24■□□□□ 0.83
TMED1-205ENST00000589638 RLFQ13129 1914 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 IGF2BP3O00425 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
TMED1-205ENST00000589638 NFIBO00712 420 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 CFBP00751 764 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 ATP2B1P20020 1258 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 CLEC4DQ8WXI8 215 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 TBC1D5Q92609 795 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 GBP4Q96PP9 640 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 PARK7Q99497 189 aaKnown RBP20.23■□□□□ 0.83
TMED1-205ENST00000589638 PARP14Q460N5 1801 aa20.23■□□□□ 0.83
TMED1-205ENST00000589638 RASSF10A6NK89 507 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 GCOM1H8Y6P7 765 aaPredicted RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 MEIS2O14770 477 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 ATP2A1O14983 1001 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 POLR2MP0CAP2 368 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 HOXA13P31271 388 aaPredicted RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 SREBF2Q12772 1141 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 KRT25Q7Z3Z0 450 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 GTF3C2Q8WUA4 911 aaPredicted RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 CAPNS2Q96L46 248 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 ZNF396Q96N95 335 aaPredicted RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 SPATC1LQ9H0A9 340 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 TXNRD2Q9NNW7 524 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 TFIP11Q9UBB9 837 aaKnown RBP20.22■□□□□ 0.83
TMED1-205ENST00000589638 RBPJLQ9UBG7 517 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 CNPY2Q9Y2B0 182 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 RABGAP1Q9Y3P9 1069 aa20.22■□□□□ 0.83
TMED1-205ENST00000589638 AOC2O75106 756 aa20.21■□□□□ 0.83
TMED1-205ENST00000589638 CLK2P49760 499 aaKnown RBP20.21■□□□□ 0.83
TMED1-205ENST00000589638 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
TMED1-205ENST00000589638 IFNL1Q8IU54 200 aa20.21■□□□□ 0.83
TMED1-205ENST00000589638 FTOQ9C0B1 505 aaKnown RBP eCLIP20.21■□□□□ 0.83
TMED1-205ENST00000589638 NOL7Q9UMY1 257 aaKnown RBP20.21■□□□□ 0.83
TMED1-205ENST00000589638 FIBPO43427 364 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 INHBEP58166 350 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 KRT85P78386 507 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 HTRA3P83110 453 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 NBR1Q14596 966 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 NONOQ15233 471 aaKnown RBP eCLIP20.2■□□□□ 0.82
TMED1-205ENST00000589638 INF2Q27J81 1249 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
TMED1-205ENST00000589638 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms