RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	ELP1	O95163	1332 aa		28.06	■■■□□ 2.08
LSM7-205	ENST00000589532	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	ICAM1	P05362	532 aa		28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	ASGR1	P07306	291 aa		28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	C6orf222	P0C671	652 aa	Predicted RBP	28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	CDK7	P50613	346 aa		28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	TBC1D10C	Q8IV04	446 aa		28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	DDX49	Q9Y6V7	483 aa	Known RBP	28.05	■■■□□ 2.08
LSM7-205	ENST00000589532	TOP1	P11387	765 aa	Known RBP	28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	ERICH6B	Q5W0A0	696 aa		28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	TTBK2	Q6IQ55	1244 aa		28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	PCSK9	Q8NBP7	692 aa	Known RBP	28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	SLC17A8	Q8NDX2	589 aa		28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	GNE	Q9Y223	722 aa	Known RBP	28.04	■■■□□ 2.08
LSM7-205	ENST00000589532	HAND2	P61296	217 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	CCDC96	Q2M329	555 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	B4GALNT3	Q6L9W6	998 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	PLEKHM2	Q8IWE5	1019 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	MORC4	Q8TE76	937 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	GLT1D1	Q96MS3	346 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	CCPG1	Q9ULG6	757 aa		28.03	■■■□□ 2.08
LSM7-205	ENST00000589532	CHD9	Q3L8U1	2897 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	PRUNE2	Q8WUY3	3088 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	ASB14	A6NK59	587 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	SNHG28	P0DPA3	235 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	PDHB	P11177	359 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	RAG1	P15918	1043 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	NUCB1	Q02818	461 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	RRP12	Q5JTH9	1297 aa	Known RBP	28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	CHD1L	Q86WJ1	897 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	TMEM39A	Q9NV64	488 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	MTMR7	Q9Y216	660 aa		28.02	■■■□□ 2.08
LSM7-205	ENST00000589532	NEDD4	P46934	1319 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	TRIM6-TRIM34	B2RNG4	842 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	PC	P11498	1178 aa	Known RBP	28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	SLC16A2	P36021	539 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	SMAD3	P84022	425 aa	Known RBP	28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	AKNAD1	Q5T1N1	836 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	SYDE2	Q5VT97	1194 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	SPC25	Q9HBM1	224 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	TOMM22	Q9NS69	142 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	VCAN	P13611	3396 aa		28.01	■■■□□ 2.07
LSM7-205	ENST00000589532	MROH7	Q68CQ1	1323 aa		28	■■■□□ 2.07
LSM7-205	ENST00000589532	DCDC2C	A8MYV0	355 aa		28	■■■□□ 2.07
LSM7-205	ENST00000589532	SDS	P20132	328 aa		28	■■■□□ 2.07
LSM7-205	ENST00000589532	PTGS1	P23219	599 aa		28	■■■□□ 2.07
LSM7-205	ENST00000589532	TAPT1	Q6NXT6	567 aa		28	■■■□□ 2.07
LSM7-205	ENST00000589532	PURB	Q96QR8	312 aa	Known RBP	28	■■■□□ 2.07
LSM7-205	ENST00000589532	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.99	■■■□□ 2.07
LSM7-205	ENST00000589532		A0A0U1RQG5	324 aa	Predicted RBP	27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	NFIB	O00712	420 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	TNFAIP2	Q03169	654 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	FPGS	Q05932	587 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	GNAS	Q5JWF2	1037 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	ZNF697	Q5TEC3	545 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	FAM126B	Q8IXS8	530 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	RILPL2	Q969X0	211 aa		27.99	■■■□□ 2.07
LSM7-205	ENST00000589532	ARVCF	O00192	962 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	TIMP1	P01033	207 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	SMPD1	P17405	629 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	BEX3	Q00994	111 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	ZNF543	Q08ER8	600 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	NSMF	Q6X4W1	530 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	TLK2	Q86UE8	772 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	FBXO16	Q8IX29	292 aa	Predicted RBP	27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	SLC43A3	Q8NBI5	491 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	PDGFC	Q9NRA1	345 aa		27.98	■■■□□ 2.07
LSM7-205	ENST00000589532	SPTBN5	Q9NRC6	3674 aa	Known RBP	27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	TMEM63B	Q5T3F8	832 aa		27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	CLEC4D	Q8WXI8	215 aa		27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	FAM161B	Q96MY7	647 aa		27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	TTC14	Q96N46	770 aa		27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	TTYH1	Q9H313	450 aa	Predicted RBP	27.97	■■■□□ 2.07
LSM7-205	ENST00000589532	MFSD6	Q6ZSS7	791 aa		27.96	■■■□□ 2.07
LSM7-205	ENST00000589532	CCDC136	Q96JN2	1154 aa		27.96	■■■□□ 2.07
LSM7-205	ENST00000589532	RNPC3	Q96LT9	517 aa	Known RBP	27.96	■■■□□ 2.07
LSM7-205	ENST00000589532	VTA1	Q9NP79	307 aa		27.96	■■■□□ 2.07
LSM7-205	ENST00000589532	GPCPD1	Q9NPB8	672 aa		27.96	■■■□□ 2.07
LSM7-205	ENST00000589532	WDR19	Q8NEZ3	1342 aa		27.95	■■■□□ 2.07
LSM7-205	ENST00000589532	CD4	P01730	458 aa		27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	BAAT	Q14032	418 aa	Predicted RBP	27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	MFSD5	Q6N075	450 aa		27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	SLC30A10	Q6XR72	485 aa		27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	RNF41	Q9H4P4	317 aa	Predicted RBP	27.95	■■■□□ 2.06
LSM7-205	ENST00000589532	LOC102724159	A0A0B4J2E5	919 aa		27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	ALDH5A1	P51649	535 aa	Predicted RBP	27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	MFAP1	P55081	439 aa	Known RBP	27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	PWP2	Q15269	919 aa	Known RBP	27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	FSCN1	Q16658	493 aa	Known RBP	27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	CXCL17	Q6UXB2	119 aa		27.94	■■■□□ 2.06
LSM7-205	ENST00000589532		Q9Y3F1	56 aa		27.94	■■■□□ 2.06
LSM7-205	ENST00000589532	GRIN2D	O15399	1336 aa		27.93	■■■□□ 2.06
LSM7-205	ENST00000589532	NT5C2	P49902	561 aa		27.93	■■■□□ 2.06
LSM7-205	ENST00000589532	EEPD1	Q7L9B9	569 aa		27.93	■■■□□ 2.06
LSM7-205	ENST00000589532	ESR2	Q92731	530 aa		27.93	■■■□□ 2.06
LSM7-205	ENST00000589532	SEMA6B	Q9H3T3	888 aa		27.93	■■■□□ 2.06
LSM7-205	ENST00000589532	IQSEC1	Q6DN90	963 aa		27.92	■■■□□ 2.06
LSM7-205	ENST00000589532	C16orf59	Q7L2K0	433 aa		27.92	■■■□□ 2.06
LSM7-205	ENST00000589532	CDX2	Q99626	313 aa	Predicted RBP	27.92	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms