RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 MORC4Q8TE76 937 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 AP5M1Q9H0R1 490 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
VMP1-209ENST00000588915 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 EYSQ5T1H1 3165 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 VCANP13611 3396 aa16.57■□□□□ 0.24
VMP1-209ENST00000588915 ASTN1O14525 1302 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.56■□□□□ 0.24
VMP1-209ENST00000588915 FGRP09769 529 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 ALAS1P13196 640 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
VMP1-209ENST00000588915 ZNF365Q70YC5 407 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 NOL8Q76FK4 1167 aaKnown RBP16.56■□□□□ 0.24
VMP1-209ENST00000588915 HERVK_113Q902F9 699 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 VTA1Q9NP79 307 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
VMP1-209ENST00000588915 ISY1Q9ULR0 285 aaKnown RBP16.56■□□□□ 0.24
VMP1-209ENST00000588915 PRUNE2Q8WUY3 3088 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 ORC4O43929 436 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 MX1P20591 662 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 BEX3Q00994 111 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 ITGA7Q13683 1181 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 ALX1Q15699 326 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 TAPT1Q6NXT6 567 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 CXCL17Q6UXB2 119 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 KCTD1Q719H9 257 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 TLK2Q86UE8 772 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 GAS2L1Q99501 681 aaPredicted RBP16.55■□□□□ 0.24
VMP1-209ENST00000588915 PBX4Q9BYU1 374 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 PPP1R12CQ9BZL4 782 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 CYP39A1Q9NYL5 469 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 ADD3Q9UEY8 706 aaKnown RBP16.55■□□□□ 0.24
VMP1-209ENST00000588915 PNMA2Q9UL42 364 aa16.55■□□□□ 0.24
VMP1-209ENST00000588915 FOXP2O15409 715 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 DYNC1LI2O43237 492 aaPredicted RBP16.54■□□□□ 0.24
VMP1-209ENST00000588915 FGBP02675 491 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 ICAM1P05362 532 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 SMPD1P17405 629 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 RAB30Q15771 203 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 AKNAD1Q5T1N1 836 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 RANBP17Q9H2T7 1088 aaKnown RBP16.54■□□□□ 0.24
VMP1-209ENST00000588915 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 PCDHB15Q9Y5E8 787 aa16.54■□□□□ 0.24
VMP1-209ENST00000588915 MUM1L1Q5H9M0 696 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 RPUSD2Q8IZ73 545 aaKnown RBP16.53■□□□□ 0.24
VMP1-209ENST00000588915 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
VMP1-209ENST00000588915 EVI5LQ96CN4 794 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 HELLSQ9NRZ9 838 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 CCPG1Q9ULG6 757 aa16.53■□□□□ 0.24
VMP1-209ENST00000588915 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 SALL3Q9BXA9 1300 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 RANBP6O60518 1105 aaKnown RBP16.52■□□□□ 0.24
VMP1-209ENST00000588915 ACRP10323 421 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 CYP2C18P33260 490 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 DUSP28Q4G0W2 176 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 TJAP1Q5JTD0 557 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
VMP1-209ENST00000588915 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
VMP1-209ENST00000588915 SPTBN5Q9NRC6 3674 aaKnown RBP16.51■□□□□ 0.23
VMP1-209ENST00000588915 GRXCR1A8MXD5 290 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 NMT2O60551 498 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 TOP1P11387 765 aaKnown RBP16.51■□□□□ 0.23
VMP1-209ENST00000588915 PBX2P40425 430 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 NSMFQ6X4W1 530 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 TTC14Q96N46 770 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 NOC4LQ9BVI4 516 aaKnown RBP16.51■□□□□ 0.23
VMP1-209ENST00000588915 INCENPQ9NQS7 918 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 TTC28Q96AY4 2481 aa16.51■□□□□ 0.23
VMP1-209ENST00000588915 RBM47A0AV96 593 aaKnown RBP16.5■□□□□ 0.23
VMP1-209ENST00000588915 SUPT20HL2P0C7V6 817 aa16.5■□□□□ 0.23
VMP1-209ENST00000588915 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
VMP1-209ENST00000588915 BAATQ14032 418 aaPredicted RBP16.5■□□□□ 0.23
VMP1-209ENST00000588915 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
VMP1-209ENST00000588915 SYDE2Q5VT97 1194 aa16.5■□□□□ 0.23
VMP1-209ENST00000588915 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
VMP1-209ENST00000588915 ATXN2LQ8WWM7 1075 aaKnown RBP16.5■□□□□ 0.23
VMP1-209ENST00000588915 MAF1Q9H063 256 aa16.5■□□□□ 0.23
VMP1-209ENST00000588915 PRDM6Q9NQX0 595 aa16.5■□□□□ 0.23
VMP1-209ENST00000588915 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 NKRFO15226 690 aaKnown RBP eCLIP16.49■□□□□ 0.23
VMP1-209ENST00000588915 B4GALT4O60513 344 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 FGAP02671 866 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 PFKMP08237 780 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 CPT1AP50416 773 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 ALDH5A1P51649 535 aaPredicted RBP16.49■□□□□ 0.23
VMP1-209ENST00000588915 SNAP25P60880 206 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 EEPD1Q7L9B9 569 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 MPHOSPH6Q99547 160 aaKnown RBP16.49■□□□□ 0.23
VMP1-209ENST00000588915 TMEM47Q9BQJ4 181 aa16.49■□□□□ 0.23
VMP1-209ENST00000588915 WDR11Q9BZH6 1224 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms