RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 KRI1Q8N9T8 703 aaKnown RBP23.36■■□□□ 1.33
ATG4D-204ENST00000586417 CCDC12Q8WUD4 166 aaPredicted RBP23.36■■□□□ 1.33
ATG4D-204ENST00000586417 PCDHA6Q9UN73 950 aa23.36■■□□□ 1.33
ATG4D-204ENST00000586417 HPSEQ9Y251 543 aa23.36■■□□□ 1.33
ATG4D-204ENST00000586417 PCDHA8Q9Y5H6 950 aa23.36■■□□□ 1.33
ATG4D-204ENST00000586417 PFKFB1P16118 471 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 SLC16A2P36021 539 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 SLC1A4P43007 532 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 TTC38Q5R3I4 469 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 RESP18Q5W5W9 173 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 RASGRP4Q8TDF6 673 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 GMCL1Q96IK5 515 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 ESYT2A0FGR8 921 aa23.35■■□□□ 1.33
ATG4D-204ENST00000586417 KINO60870 393 aaKnown RBP23.35■■□□□ 1.33
ATG4D-204ENST00000586417 PNMA6FA0A0J9YX94 578 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 PPP1R11O60927 126 aaPredicted RBP23.34■■□□□ 1.33
ATG4D-204ENST00000586417 GRIN1Q05586 938 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 MKRN3Q13064 507 aaKnown RBP23.34■■□□□ 1.33
ATG4D-204ENST00000586417 PPIL2Q13356 520 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 FAM83BQ5T0W9 1011 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 CKAP2LQ8IYA6 745 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 SRPRBQ9Y5M8 271 aaKnown RBP23.34■■□□□ 1.33
ATG4D-204ENST00000586417 MRVI1Q9Y6F6 885 aa23.34■■□□□ 1.33
ATG4D-204ENST00000586417 SMCO2A6NFE2 343 aa23.33■■□□□ 1.33
ATG4D-204ENST00000586417 TMEM88BA6NKF7 163 aa23.33■■□□□ 1.33
ATG4D-204ENST00000586417 CTAGE5O15320 804 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 BMP15O95972 392 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 BMP3P12645 472 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 WNK4Q96J92 1243 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 C6orf50Q9HD87 102 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 KCNH4Q9UQ05 1017 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 TLL2Q9Y6L7 1015 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 C19orf81C9J6K1 198 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 ZBTB5O15062 677 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 VCAM1P19320 739 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 GNA11P29992 359 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 USP14P54578 494 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 ZNF174Q15697 407 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 ZNF579Q8NAF0 562 aaKnown RBP23.32■■□□□ 1.32
ATG4D-204ENST00000586417 COA7Q96BR5 231 aa23.32■■□□□ 1.32
ATG4D-204ENST00000586417 SH3D19Q5HYK7 790 aa23.31■■□□□ 1.32
ATG4D-204ENST00000586417 PPP1R18Q6NYC8 613 aa23.31■■□□□ 1.32
ATG4D-204ENST00000586417 ABT1Q9ULW3 272 aaKnown RBP23.31■■□□□ 1.32
ATG4D-204ENST00000586417 A0A0G2JLL6 359 aaPredicted RBP23.3■■□□□ 1.32
ATG4D-204ENST00000586417 CCDC194A0A1B0GVG4 234 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 TMEM232C9JQI7 657 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 CXCL11O14625 94 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 ZNF202O95125 648 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 CCDC192P0DO97 292 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 ATP2C1P98194 919 aaPredicted RBP23.3■■□□□ 1.32
ATG4D-204ENST00000586417 PRRT2Q7Z6L0 340 aaPredicted RBP23.3■■□□□ 1.32
ATG4D-204ENST00000586417 RNF214Q8ND24 703 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 LPAR1Q92633 364 aa23.3■■□□□ 1.32
ATG4D-204ENST00000586417 ZNF157P51786 506 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-204ENST00000586417 TYRO3Q06418 890 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 SPRYD7Q5W111 196 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 C12orf42Q96LP6 360 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 FBXO28Q9NVF7 368 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 MOGSQ13724 837 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 TREML2Q5T2D2 321 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 RGMBQ6NW40 437 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 KRT25Q7Z3Z0 450 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 RPAP3Q9H6T3 665 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-204ENST00000586417 LOC285556D6RIA3 1793 aa23.29■■□□□ 1.32
ATG4D-204ENST00000586417 WDR46O15213 610 aaKnown RBP23.28■■□□□ 1.32
ATG4D-204ENST00000586417 SYKP43405 635 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 PTGDRQ13258 359 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 QRICH1Q2TAL8 776 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 BTNL9Q6UXG8 535 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 RASAL3Q86YV0 1011 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 MS4A4AQ96JQ5 239 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 TIGD1Q96MW7 591 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 TMOD4Q9NZQ9 345 aa23.28■■□□□ 1.32
ATG4D-204ENST00000586417 INF2Q27J81 1249 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 SPECC1Q5M775 1068 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 GADL1Q6ZQY3 521 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 C4orf32Q8N8J7 132 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 FERMT2Q96AC1 680 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 TANGO6Q9C0B7 1094 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 CSRNP2Q9H175 543 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 MCM7P33993 719 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 ADCY7P51828 1080 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 SNAPC2Q13487 334 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 CDC37Q16543 378 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-204ENST00000586417 SAMD1Q6SPF0 538 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-204ENST00000586417 REXO1Q8N1G1 1221 aaKnown RBP23.27■■□□□ 1.32
ATG4D-204ENST00000586417 KCNH3Q9ULD8 1083 aa23.27■■□□□ 1.32
ATG4D-204ENST00000586417 PARP14Q460N5 1801 aa23.27■■□□□ 1.31
ATG4D-204ENST00000586417 APLP1P51693 650 aa23.26■■□□□ 1.31
ATG4D-204ENST00000586417 IKQ13123 557 aaPredicted RBP23.26■■□□□ 1.31
ATG4D-204ENST00000586417 NONOQ15233 471 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATG4D-204ENST00000586417 SYDE2Q5VT97 1194 aa23.26■■□□□ 1.31
ATG4D-204ENST00000586417 SDF4Q9BRK5 362 aa23.26■■□□□ 1.31
ATG4D-204ENST00000586417 RIC8AQ9NPQ8 531 aa23.26■■□□□ 1.31
ATG4D-204ENST00000586417 RLFQ13129 1914 aa23.26■■□□□ 1.31
ATG4D-204ENST00000586417 ZBTB48P10074 688 aaPredicted RBP23.25■■□□□ 1.31
ATG4D-204ENST00000586417 STAT2P52630 851 aa23.25■■□□□ 1.31
ATG4D-204ENST00000586417 SNAP25P60880 206 aa23.25■■□□□ 1.31
ATG4D-204ENST00000586417 TMEM260Q9NX78 707 aa23.25■■□□□ 1.31
ATG4D-204ENST00000586417 BIN2Q9UBW5 565 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms