RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MYH7P12883 1935 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 CUL9Q8IWT3 2517 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 CABYRO75952 493 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 TAPT1Q6NXT6 567 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 CCDC174Q6PII3 467 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 TIFAQ96CG3 184 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 Q9Y3F1 56 aa17.17■□□□□ 0.34
SDF2-202ENST00000585428 GRXCR1A8MXD5 290 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 TLR3O15455 904 aaKnown RBP17.16■□□□□ 0.34
SDF2-202ENST00000585428 NMT2O60551 498 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 FGRP09769 529 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 ACRP10323 421 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 SMPD1P17405 629 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 PBX2P40425 430 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 SNAP25P60880 206 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 MUM1L1Q5H9M0 696 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 CXCL17Q6UXB2 119 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 MORC4Q8TE76 937 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 PBX4Q9BYU1 374 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 PDGFCQ9NRA1 345 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 CYP39A1Q9NYL5 469 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 ANAPC4Q9UJX5 808 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
SDF2-202ENST00000585428 SPTBN5Q9NRC6 3674 aaKnown RBP17.16■□□□□ 0.34
SDF2-202ENST00000585428 DYNC1LI2O43237 492 aaPredicted RBP17.15■□□□□ 0.34
SDF2-202ENST00000585428 ALAS1P13196 640 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 CYP2C18P33260 490 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 TMEM63BQ5T3F8 832 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
SDF2-202ENST00000585428 USP38Q8NB14 1042 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 CHMP4CQ96CF2 233 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 SEZ6LQ9BYH1 1024 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 PPP1R12CQ9BZL4 782 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 IL23AQ9NPF7 189 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
SDF2-202ENST00000585428 DDX49Q9Y6V7 483 aaKnown RBP17.15■□□□□ 0.34
SDF2-202ENST00000585428 TSPY2A6NKD2 308 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 PTGS1P23219 599 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
SDF2-202ENST00000585428 ALX1Q15699 326 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 FSCN1Q16658 493 aaKnown RBP17.14■□□□□ 0.33
SDF2-202ENST00000585428 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 TLK2Q86UE8 772 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 SYMPKQ92797 1274 aaKnown RBP17.14■□□□□ 0.33
SDF2-202ENST00000585428 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
SDF2-202ENST00000585428 FGBP02675 491 aa17.13■□□□□ 0.33
SDF2-202ENST00000585428 ICAM1P05362 532 aa17.13■□□□□ 0.33
SDF2-202ENST00000585428 MX1P20591 662 aa17.13■□□□□ 0.33
SDF2-202ENST00000585428 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
SDF2-202ENST00000585428 PSRC1Q6PGN9 363 aaPredicted RBP17.13■□□□□ 0.33
SDF2-202ENST00000585428 PURBQ96QR8 312 aaKnown RBP17.13■□□□□ 0.33
SDF2-202ENST00000585428 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
SDF2-202ENST00000585428 CXXC1Q9P0U4 656 aaPredicted RBP17.13■□□□□ 0.33
SDF2-202ENST00000585428 ISY1Q9ULR0 285 aaKnown RBP17.13■□□□□ 0.33
SDF2-202ENST00000585428 ORC4O43929 436 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 ZEB2O60315 1214 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 RASGRP2Q7LDG7 609 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 DCAF4Q8WV16 495 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 VWCEQ96DN2 955 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 TRPV6Q9H1D0 765 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
SDF2-202ENST00000585428 HIPK3Q9H422 1215 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 UMODL1Q5DID0 1318 aa17.12■□□□□ 0.33
SDF2-202ENST00000585428 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 B4GALT4O60513 344 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 RANBP6O60518 1105 aaKnown RBP17.11■□□□□ 0.33
SDF2-202ENST00000585428 BAATQ14032 418 aaPredicted RBP17.11■□□□□ 0.33
SDF2-202ENST00000585428 DUSP28Q4G0W2 176 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
SDF2-202ENST00000585428 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 CCPG1Q9ULG6 757 aa17.11■□□□□ 0.33
SDF2-202ENST00000585428 MYH4Q9Y623 1939 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 LOC102724159A0A0B4J2E5 919 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 RBM47A0AV96 593 aaKnown RBP17.1■□□□□ 0.33
SDF2-202ENST00000585428 FGAP02671 866 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 SLC16A2P36021 539 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 PSMC6P62333 389 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 PWP2Q15269 919 aaKnown RBP17.1■□□□□ 0.33
SDF2-202ENST00000585428 NSMFQ6X4W1 530 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 FBXO16Q8IX29 292 aaPredicted RBP17.1■□□□□ 0.33
SDF2-202ENST00000585428 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 PRDM12Q9H4Q4 367 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 MSRAQ9UJ68 235 aa17.1■□□□□ 0.33
SDF2-202ENST00000585428 CCL23P55773 120 aa17.09■□□□□ 0.33
SDF2-202ENST00000585428 ADGRE1Q14246 886 aa17.09■□□□□ 0.33
SDF2-202ENST00000585428 RAB30Q15771 203 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms