RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 AMNQ9BXJ7 453 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 RNF208Q9H0X6 261 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 ALDH8A1Q9H2A2 487 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-215ENST00000584944 RANBP17Q9H2T7 1088 aaKnown RBP16.05■□□□□ 0.16
TRAF4-215ENST00000584944 TRIOBPQ9H2D6 2365 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 STRNO43815 780 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 ADCY3O60266 1144 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 CNMDO75829 334 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
TRAF4-215ENST00000584944 Q3C1V9 767 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 TMTC3Q6ZXV5 915 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 GPR142Q7Z601 462 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 DPP9Q86TI2 863 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 AGBL1Q96MI9 1066 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 TRERF1Q96PN7 1200 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 MMP19Q99542 508 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 NUDT12Q9BQG2 462 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 AGXT2Q9BYV1 514 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 PORCNQ9H237 461 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 ACAD9Q9H845 621 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
TRAF4-215ENST00000584944 ZNF214Q9UL59 606 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-215ENST00000584944 LIMCH1Q9UPQ0 1083 aa16.04■□□□□ 0.16
TRAF4-215ENST00000584944 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 PLEKHA8P1O95397 391 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 IRF5Q13568 498 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 QRICH1Q2TAL8 776 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
TRAF4-215ENST00000584944 PXYLP1Q8TE99 480 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 U2AF1L4Q8WU68 220 aaKnown RBP16.03■□□□□ 0.16
TRAF4-215ENST00000584944 ZSCAN31Q96LW9 406 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-215ENST00000584944 PIGSQ96S52 555 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 UNC93B1Q9H1C4 597 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 MRPL11Q9Y3B7 192 aaKnown RBP16.03■□□□□ 0.16
TRAF4-215ENST00000584944 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
TRAF4-215ENST00000584944 ABCB11O95342 1321 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 SLC15A5A6NIM6 579 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 RGS2P41220 211 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 MCM2P49736 904 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 EVCP57679 992 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 HEATR3Q7Z4Q2 680 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
TRAF4-215ENST00000584944 NCOA5Q9HCD5 579 aaKnown RBP16.02■□□□□ 0.16
TRAF4-215ENST00000584944 PFASO15067 1338 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 SGPL1O95470 568 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 ELNP15502 786 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
TRAF4-215ENST00000584944 SSRP1Q08945 709 aaKnown RBP16.01■□□□□ 0.15
TRAF4-215ENST00000584944 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
TRAF4-215ENST00000584944 DPF3Q92784 378 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 TPCN1Q9ULQ1 816 aa16.01■□□□□ 0.15
TRAF4-215ENST00000584944 V9GY48 417 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-215ENST00000584944 INHAP05111 366 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 PTPREP23469 700 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 CUL5Q93034 780 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 MPHOSPH6Q99547 160 aaKnown RBP16■□□□□ 0.15
TRAF4-215ENST00000584944 HTATIP2Q9BUP3 242 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
TRAF4-215ENST00000584944 SH2B1Q9NRF2 756 aaPredicted RBP16■□□□□ 0.15
TRAF4-215ENST00000584944 RANBP2P49792 3224 aaKnown RBP16■□□□□ 0.15
TRAF4-215ENST00000584944 ZNF536O15090 1300 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 PFKFB2O60825 505 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 CAPN2P17655 700 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 CYP2B6P20813 491 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 ADORA2AP29274 412 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 CDC27P30260 824 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 TRMT44Q8IYL2 757 aaKnown RBP15.99■□□□□ 0.15
TRAF4-215ENST00000584944 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-215ENST00000584944 KIF2CQ99661 725 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 APBA2Q99767 749 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 RIPK3Q9Y572 518 aa15.99■□□□□ 0.15
TRAF4-215ENST00000584944 A0A0G2JMZ2 1700 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 hCG_1642624A0A1W2PR95 340 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 B4DLN1 442 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 CYTH3O43739 400 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 FARP2O94887 1054 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-215ENST00000584944 XBP1P17861 261 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 CALML3P27482 149 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 MRPL12P52815 198 aaKnown RBP15.98■□□□□ 0.15
TRAF4-215ENST00000584944 NAPAP54920 295 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 RNF207Q6ZRF8 634 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-215ENST00000584944 WASF1Q92558 559 aa15.98■□□□□ 0.15
TRAF4-215ENST00000584944 PHKBQ93100 1093 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms