RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 TEX13BQ9BXU2 312 aa19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 RIC8AQ9NPQ8 531 aa19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 MRPL11Q9Y3B7 192 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SMCHD1A6NHR9 2005 aa19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 M0R2N6 131 aa19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SREBF2Q12772 1141 aa19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 GNL2Q13823 731 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 TNFRSF25Q93038 417 aa19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PARK7Q99497 189 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-230ENST00000584042 BTBD18B2RXH4 712 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PDHXO00330 501 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 MRPL12P52815 198 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 INHBEP58166 350 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 GHRHRQ02643 423 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 TMEM132BQ14DG7 1078 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 TKFCQ3LXA3 575 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PIK3CDO00329 1044 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 OPLAHO14841 1288 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 TAL1P17542 331 aaPredicted RBP19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 COPB2P35606 906 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 NR5A1Q13285 461 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CLEC17AQ6ZS10 378 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 RABGAP1Q9Y3P9 1069 aa19.17■□□□□ 0.66
CDK5RAP3-230ENST00000584042 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CLK2P49760 499 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 NOGQ13253 232 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 AP3B2Q13367 1082 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 POTEEQ6S8J3 1075 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SAMD3Q8N6K7 520 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PTPN18Q99952 460 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 MAF1Q9H063 256 aa19.16■□□□□ 0.66
CDK5RAP3-230ENST00000584042 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CNMDO75829 334 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 ALAS1P13196 640 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 STAT3P40763 770 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CLEC4DQ8WXI8 215 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 GBP4Q96PP9 640 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 SPATC1LQ9H0A9 340 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 RNF146Q9NTX7 359 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 BTBD7Q9P203 1132 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
CDK5RAP3-230ENST00000584042 CCDC194A0A1B0GVG4 234 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ADAMTS3O15072 1205 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CYP2C8P10632 490 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TRAPPC10P48553 1259 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 DEFB115Q30KQ5 88 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 RASGRP4Q8TDF6 673 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CAPNS2Q96L46 248 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ADGRA2Q96PE1 1338 aa19.14■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TCHHQ07283 1943 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 NFIBO00712 420 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MEIS2O14770 477 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 UBE2SQ16763 222 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 IFNL1Q8IU54 200 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 REM2Q8IYK8 340 aaPredicted RBP19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 CHST13Q8NET6 341 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 PAGR1Q9BTK6 254 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MAP3K20Q9NYL2 800 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 MORF4L1Q9UBU8 362 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FBXO40Q9UH90 709 aa19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-230ENST00000584042 LCTP09848 1927 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 GCOM1H8Y6P7 765 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 BAG4O95429 457 aaKnown RBP19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 SLC25A27O95847 323 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 FOSP01100 380 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 POLR2MP0CAP2 368 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 TM4SF4P48230 202 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 HSD17B4P51659 736 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ERVK-9P63128 1117 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 ERVK-24P63145 666 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 KRT85P78386 507 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 PLS1Q14651 629 aa19.12■□□□□ 0.65
CDK5RAP3-230ENST00000584042 NONOQ15233 471 aaKnown RBP eCLIP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms