RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 YY1P25490 414 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 ADCY7P51828 1080 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 HUNKP57058 714 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 IRX3P78415 501 aaPredicted RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 KIF23Q02241 960 aaPredicted RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 GHRHRQ02643 423 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 SPRYD7Q5W111 196 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 CST9Q5W186 159 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 ANKRD23Q86SG2 305 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 SAPCD2Q86UD0 394 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 DIS3L2Q8IYB7 885 aaKnown RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 REXO1Q8N1G1 1221 aaKnown RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 CMTR1Q8N1G2 835 aaKnown RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 JMYQ8N9B5 988 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 TNPO1Q92973 898 aaKnown RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 PSTPIP2Q9H939 334 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 EHMT1Q9H9B1 1298 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 VPS54Q9P1Q0 977 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 FBXO40Q9UH90 709 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 ZDHHC9Q9Y397 364 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 TLL2Q9Y6L7 1015 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 CCDC194A0A1B0GVG4 234 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
CASC3-209ENST00000583902 SLC25A27O95847 323 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 SLC16A2P36021 539 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 RESTQ13127 1097 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 ZYXQ15942 572 aaKnown RBP10.55□□□□□ -0.72
CASC3-209ENST00000583902 SLC35G1Q2M3R5 365 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 KIAA1755Q5JYT7 1200 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.55□□□□□ -0.72
CASC3-209ENST00000583902 CHST13Q8NET6 341 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 KIFC2Q96AC6 838 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 CLMNQ96JQ2 1002 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 POLR3EQ9NVU0 708 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 ELP1O95163 1332 aa10.55□□□□□ -0.72
CASC3-209ENST00000583902 LOC102724159A0A0B4J2E5 919 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 M0R2N6 131 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 LAD1O00515 517 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 YEATS4O95619 227 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 C7P10643 843 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 CCNA1P78396 465 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 SREBF2Q12772 1141 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 PWP2Q15269 919 aaKnown RBP10.54□□□□□ -0.72
CASC3-209ENST00000583902 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 MOXD1Q6UVY6 613 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 KCNG4Q8TDN1 519 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 MS4A4AQ96JQ5 239 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
CASC3-209ENST00000583902 NUP88Q99567 741 aaPredicted RBP10.54□□□□□ -0.72
CASC3-209ENST00000583902 RTEL1Q9NZ71 1219 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 CCPG1Q9ULG6 757 aa10.54□□□□□ -0.72
CASC3-209ENST00000583902 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 RBBP6Q7Z6E9 1792 aaKnown RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 SPDYE16A6NNV3 312 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 BTBD18B2RXH4 712 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 GCOM1H8Y6P7 765 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 BAG4O95429 457 aaKnown RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 POLR2MP0CAP2 368 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 GCFC2P16383 781 aaKnown RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 NCLP19338 710 aaKnown RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 USP11P51784 963 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 ZNF157P51786 506 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 PKP1Q13835 747 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 NONOQ15233 471 aaKnown RBP eCLIP10.53□□□□□ -0.72
CASC3-209ENST00000583902 SKOR2Q2VWA4 1001 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 GADL1Q6ZQY3 521 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 CCDC84Q86UT8 332 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 ZNF784Q8NCA9 323 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 ANP32EQ9BTT0 268 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.53□□□□□ -0.72
CASC3-209ENST00000583902 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 PFASO15067 1338 aa10.53□□□□□ -0.72
CASC3-209ENST00000583902 COL11A1P12107 1806 aaPredicted RBP10.52□□□□□ -0.73
CASC3-209ENST00000583902 CCL15-CCL14A0A0B4J2E2 113 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 B4DLN1 442 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 SLC10A3P09131 477 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 STAT3P40763 770 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
CASC3-209ENST00000583902 CLK2P49760 499 aaKnown RBP10.52□□□□□ -0.73
CASC3-209ENST00000583902 NPY5RQ15761 445 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 CCL15Q16663 113 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 XRRA1Q6P2D8 792 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 DLK2Q6UY11 383 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 MOB2Q70IA6 237 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 RASAL3Q86YV0 1011 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 RIOX2Q8IUF8 465 aa10.52□□□□□ -0.73
CASC3-209ENST00000583902 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms