RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 GRXCR2A6NFK2 248 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 F5H6K3 240 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 KPNA6O60684 536 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 IQCF3P0C7M6 154 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 CYP2C9P11712 490 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 PDE6AP16499 860 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 PTPN5P54829 565 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 PSMC6P62333 389 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 KLRC3Q07444 240 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 POP1Q99575 1024 aaKnown RBP13.33□□□□□ -0.28
CASC3-208ENST00000583649 MTG1Q9BT17 334 aaPredicted RBP13.33□□□□□ -0.28
CASC3-208ENST00000583649 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.33□□□□□ -0.28
CASC3-208ENST00000583649 IRF2BPLQ9H1B7 796 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 TRMT13Q9NUP7 481 aaKnown RBP13.33□□□□□ -0.28
CASC3-208ENST00000583649 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 GRIN2DO15399 1336 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
CASC3-208ENST00000583649 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
CASC3-208ENST00000583649 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
CASC3-208ENST00000583649 LPXNO60711 386 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 CYP2D6P10635 497 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
CASC3-208ENST00000583649 POLA2Q14181 598 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 TKFCQ3LXA3 575 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.32□□□□□ -0.28
CASC3-208ENST00000583649 SSH3Q8TE77 659 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
CASC3-208ENST00000583649 RAD9AQ99638 391 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 HOMER2Q9NSB8 354 aa13.32□□□□□ -0.28
CASC3-208ENST00000583649 POTEB3A0JP26 581 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 IL9P15248 144 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 SMPD1P17405 629 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 POTEBQ6S5H4 581 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
CASC3-208ENST00000583649 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
CASC3-208ENST00000583649 SUGCTQ9HAC7 445 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 ISY1Q9ULR0 285 aaKnown RBP13.31□□□□□ -0.28
CASC3-208ENST00000583649 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
CASC3-208ENST00000583649 NOP58Q9Y2X3 529 aaKnown RBP13.31□□□□□ -0.28
CASC3-208ENST00000583649 PARP14Q460N5 1801 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 NCK2O43639 380 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 NDUFB10O96000 172 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 MYL3P08590 195 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 ERVK-21P61565 698 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 IKQ13123 557 aaPredicted RBP13.3□□□□□ -0.28
CASC3-208ENST00000583649 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 AACSQ86V21 672 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
CASC3-208ENST00000583649 CAGE1Q8TC20 777 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
CASC3-208ENST00000583649 ARMT1Q9H993 441 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
CASC3-208ENST00000583649 ARPP21Q9UBL0 812 aaPredicted RBP13.3□□□□□ -0.28
CASC3-208ENST00000583649 ADD3Q9UEY8 706 aaKnown RBP13.3□□□□□ -0.28
CASC3-208ENST00000583649 MTUS1Q9ULD2 1270 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 ASTN1O14525 1302 aa13.3□□□□□ -0.28
CASC3-208ENST00000583649 MYH8P13535 1937 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 ABHD14A-ACY1A0A1B0GW23 586 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 EP400NLQ6ZTU2 488 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 FGD4Q96M96 766 aa13.29□□□□□ -0.28
CASC3-208ENST00000583649 REV3LO60673 3130 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 MYO5AQ9Y4I1 1855 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 LOC102724159A0A0B4J2E5 919 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 GOLIM4O00461 696 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 NKRFO15226 690 aaKnown RBP eCLIP13.28□□□□□ -0.28
CASC3-208ENST00000583649 BCAR3O75815 825 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 MBD4O95243 580 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 STAT2P52630 851 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 RARSP54136 660 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 EVX2Q03828 476 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 IKBKEQ14164 716 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 PWP2Q15269 919 aaKnown RBP13.28□□□□□ -0.28
CASC3-208ENST00000583649 CNKSR3Q6P9H4 555 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 HFE2Q6ZVN8 426 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 EEPD1Q7L9B9 569 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
CASC3-208ENST00000583649 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms