RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 PABPC4Q13310 644 aaKnown RBP eCLIP16.75■□□□□ 0.27
SENP3-208ENST00000583277 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 RCOR1Q9UKL0 485 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 CCPG1Q9ULG6 757 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
SENP3-208ENST00000583277 BMP15O95972 392 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 STK38Q15208 465 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.27
SENP3-208ENST00000583277 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
SENP3-208ENST00000583277 CST9Q5W186 159 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 RASGRP4Q8TDF6 673 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 ADAMTS5Q9UNA0 930 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 PASKQ96RG2 1323 aa16.74■□□□□ 0.27
SENP3-208ENST00000583277 KIF3CO14782 793 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 GJA5P36382 358 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 TOB1P50616 345 aaPredicted RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 GTF2A2P52657 109 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 UBE2HP62256 183 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 EARS2Q5JPH6 523 aaKnown RBP16.73■□□□□ 0.27
SENP3-208ENST00000583277 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 JMYQ8N9B5 988 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 LINC00301Q8NCQ3 95 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 FTOQ9C0B1 505 aaKnown RBP eCLIP16.73■□□□□ 0.27
SENP3-208ENST00000583277 CLIC4Q9Y696 253 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 ZNF536O15090 1300 aa16.73■□□□□ 0.27
SENP3-208ENST00000583277 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 SPDYE16A6NNV3 312 aaPredicted RBP16.72■□□□□ 0.27
SENP3-208ENST00000583277 PIK3CDO00329 1044 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 MBD3O95983 291 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 CETPP11597 493 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 HUNKP57058 714 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 NBR1Q14596 966 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 SF3A1Q15459 793 aaKnown RBP16.72■□□□□ 0.27
SENP3-208ENST00000583277 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 BIN2Q9UBW5 565 aaPredicted RBP16.72■□□□□ 0.27
SENP3-208ENST00000583277 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
SENP3-208ENST00000583277 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 ATP2A1O14983 1001 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 ADAMTS3O15072 1205 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 SPTLC2O15270 562 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 UBE2SQ16763 222 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 JAKMIP3Q5VZ66 844 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 REPS2Q8NFH8 660 aa16.72■□□□□ 0.27
SENP3-208ENST00000583277 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
SENP3-208ENST00000583277 OSBPP22059 807 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 ORC2Q13416 577 aaPredicted RBP16.71■□□□□ 0.27
SENP3-208ENST00000583277 MOGSQ13724 837 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
SENP3-208ENST00000583277 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 LBX2Q6XYB7 198 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 NEK8Q86SG6 692 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 SAMD3Q8N6K7 520 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 AGBL1Q96MI9 1066 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 RAVER2Q9HCJ3 691 aaKnown RBP16.71■□□□□ 0.27
SENP3-208ENST00000583277 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.71■□□□□ 0.27
SENP3-208ENST00000583277 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
SENP3-208ENST00000583277 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 MEIS2O14770 477 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 OPLAHO14841 1288 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 PPP6R2O75170 966 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 ME1P48163 572 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 PTPAQ15257 358 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 INF2Q27J81 1249 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 TKFCQ3LXA3 575 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 TEX13BQ9BXU2 312 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 TMEM260Q9NX78 707 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
SENP3-208ENST00000583277 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
SENP3-208ENST00000583277 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 TRAK2O60296 914 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 GHRHRQ02643 423 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 USP17L6PQ6QN14 398 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 TBCKQ8TEA7 893 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 GTF3C2Q8WUA4 911 aaPredicted RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 MAF1Q9H063 256 aa16.69■□□□□ 0.26
SENP3-208ENST00000583277 ASCC2Q9H1I8 757 aaPredicted RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 DDX49Q9Y6V7 483 aaKnown RBP16.69■□□□□ 0.26
SENP3-208ENST00000583277 CCL15-CCL14A0A0B4J2E2 113 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 TOMM70O94826 608 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 ALAS1P13196 640 aa16.68■□□□□ 0.26
SENP3-208ENST00000583277 TAL1P17542 331 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms