RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-215ENST00000582453 DDR2Q16832 855 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 HLA-DQA1Q5Y7H0 255 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 OGFOD2Q6N063 350 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 GALNT18Q6P9A2 607 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 EEPD1Q7L9B9 569 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 SLCO6A1Q86UG4 719 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 NLRX1Q86UT6 975 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 IRF2BP1Q8IU81 584 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 POU5F2Q8N7G0 328 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 TMEM52Q8NDY8 209 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 MICAL1Q8TDZ2 1067 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 ARMC5Q96C12 935 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 SHISA4Q96DD7 197 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 EPN3Q9H201 632 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 CRTAC1Q9NQ79 661 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 AKT3Q9Y243 479 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 YBX2Q9Y2T7 364 aaKnown RBP4.82□□□□□ -1.64
MSI2-215ENST00000582453 EMC9Q9Y3B6 208 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 TAF6LQ9Y6J9 622 aa4.82□□□□□ -1.64
MSI2-215ENST00000582453 RAD54L2Q9Y4B4 1467 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 STXBP3O00186 592 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 VAMP4O75379 141 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 FARP2O94887 1054 aaPredicted RBP4.81□□□□□ -1.64
MSI2-215ENST00000582453 GJB6O95452 261 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 TBC1D8O95759 1140 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 RAB33AQ14088 237 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 MLANAQ16655 118 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 HSF5Q4G112 596 aaPredicted RBP4.81□□□□□ -1.64
MSI2-215ENST00000582453 NBPF6Q5VWK0 638 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 MRM1Q6IN84 353 aaKnown RBP4.81□□□□□ -1.64
MSI2-215ENST00000582453 CKAP2LQ8IYA6 745 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 CELF2-AS1Q8N7Q2 184 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 INTS4Q96HW7 963 aaKnown RBP4.81□□□□□ -1.64
MSI2-215ENST00000582453 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 PTCHD1Q96NR3 888 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 MCMBPQ9BTE3 642 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 BACE2Q9Y5Z0 518 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 ZNF608Q9ULD9 1512 aaPredicted RBP4.81□□□□□ -1.64
MSI2-215ENST00000582453 GRIN2BQ13224 1484 aa4.81□□□□□ -1.64
MSI2-215ENST00000582453 KIF27Q86VH2 1401 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 ABCA5Q8WWZ7 1642 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 KCNH1O95259 989 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 EFEMP2O95967 443 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 PNLIPP16233 465 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 SEPHS1P49903 392 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 RBM10P98175 930 aaKnown RBP4.8□□□□□ -1.64
MSI2-215ENST00000582453 SF3A1Q15459 793 aaKnown RBP4.8□□□□□ -1.64
MSI2-215ENST00000582453 DPY19L1Q2PZI1 675 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 SV2CQ496J9 727 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 PRR23BQ6ZRT6 265 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 KSR1Q8IVT5 923 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 TRIM59Q8IWR1 403 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 PPP1R14AQ96A00 147 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 MRGPRX3Q96LB0 322 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 JMJD8Q96S16 334 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 PLCD4Q9BRC7 762 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
MSI2-215ENST00000582453 TRIM55Q9BYV6 548 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 NSUN3Q9H649 340 aaKnown RBP4.8□□□□□ -1.64
MSI2-215ENST00000582453 ACSL6Q9UKU0 697 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 GAPVD1Q14C86 1478 aa4.8□□□□□ -1.64
MSI2-215ENST00000582453 MAGI1Q96QZ7 1491 aaPredicted RBP4.8□□□□□ -1.64
MSI2-215ENST00000582453 TDRD9Q8NDG6 1382 aaKnown RBP4.79□□□□□ -1.64
MSI2-215ENST00000582453 ERICH3Q5RHP9 1530 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 AGRPO00253 132 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 CORO7P57737 925 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 LAPTM5Q13571 262 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 SLC10A6Q3KNW5 377 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 GTF2IRD2BQ6EKJ0 949 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 GTF2IRD2Q86UP8 949 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 ZNF227Q86WZ6 799 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 JAMLQ86YT9 394 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 FBXO15Q8NCQ5 510 aaPredicted RBP4.79□□□□□ -1.64
MSI2-215ENST00000582453 SREK1Q8WXA9 508 aaKnown RBP4.79□□□□□ -1.64
MSI2-215ENST00000582453 COPS5Q92905 334 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 FAM84AQ96KN4 292 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 NKX2-4Q9H2Z4 354 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
MSI2-215ENST00000582453 CYP26B1Q9NR63 512 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 ST7Q9NRC1 585 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 LRP2BPQ9P2M1 347 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 AQRO60306 1485 aaKnown RBP eCLIP4.79□□□□□ -1.647e-9■■■■■ 35.6
MSI2-215ENST00000582453 EEA1Q15075 1411 aa4.79□□□□□ -1.64
MSI2-215ENST00000582453 EIF4G3O43432 1585 aaKnown RBP4.78□□□□□ -1.64
MSI2-215ENST00000582453 U2SURPO15042 1029 aaKnown RBP4.78□□□□□ -1.64
MSI2-215ENST00000582453 ITGAVP06756 1048 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 PRKCAP17252 672 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 PAMP19021 973 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 L1CAMP32004 1257 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 GTF2F1P35269 517 aaKnown RBP eCLIP4.78□□□□□ -1.647e-7■■■■■ 38.5
MSI2-215ENST00000582453 PDE6BP35913 854 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 ARL4AP40617 200 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 GALK1P51570 392 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 CYP4F8P98187 520 aa4.78□□□□□ -1.64
MSI2-215ENST00000582453 MESP2Q0VG99 397 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms