RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 R3HDM1Q15032 1099 aaKnown RBP4.44□□□□□ -1.7
KPNB1-208ENST00000580019 SURF1Q15526 300 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 DPH6Q7L8W6 267 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 ZG16BQ96DA0 208 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 ASB16Q96NS5 453 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 IMPACTQ9P2X3 320 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 PLA2G2DQ9UNK4 145 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 TCAF1Q9Y4C2 921 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 TESMINQ9Y4I5 508 aa4.44□□□□□ -1.7
KPNB1-208ENST00000580019 LAMTOR5O43504 91 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 ENDOUP21128 410 aaKnown RBP4.43□□□□□ -1.7
KPNB1-208ENST00000580019 MAPK1P28482 360 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 YARSP54577 528 aaKnown RBP4.43□□□□□ -1.7
KPNB1-208ENST00000580019 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.43□□□□□ -1.7
KPNB1-208ENST00000580019 EAPPQ56P03 285 aaPredicted RBP4.43□□□□□ -1.7
KPNB1-208ENST00000580019 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 GIMAP6Q6P9H5 292 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 BHLHA9Q7RTU4 235 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 FAM13CQ8NE31 585 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 DNERQ8NFT8 737 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 ALKBH8Q96BT7 664 aaKnown RBP4.43□□□□□ -1.7
KPNB1-208ENST00000580019 TRIM8Q9BZR9 551 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 PPP4R1LQ9P1A2 415 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 DCTN4Q9UJW0 460 aa4.43□□□□□ -1.7
KPNB1-208ENST00000580019 A0A087X1B8 175 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 MROH6A6NGR9 719 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 SRGAP3O43295 1099 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 ASGR2P07307 311 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 DBHP09172 617 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 INHBCP55103 352 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 FAM26FQ5R3K3 315 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 GLYCTKQ8IVS8 523 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 DMRTB1Q96MA1 342 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 BACH2Q9BYV9 841 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 TANGO6Q9C0B7 1094 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 SRCIN1Q9C0H9 1055 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 TMA7Q9Y2S6 64 aaKnown RBP4.42□□□□□ -1.7
KPNB1-208ENST00000580019 HCFC2Q9Y5Z7 792 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 CECR2Q9BXF3 1484 aa4.42□□□□□ -1.7
KPNB1-208ENST00000580019 A0A1W2PQ27 194 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 A0A1W2PQ64 194 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 A0A1W2PQC6 194 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 A0A1W2PQD8 194 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 NPEPPSL1A6NEC2 478 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 H3BRB1 525 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 IL12RB1P42701 662 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 KRTAP10-7P60409 375 aaPredicted RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 TAGLNQ01995 201 aaKnown RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 FOXE3Q13461 319 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 NOL8Q76FK4 1167 aaKnown RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 CIR1Q86X95 450 aaPredicted RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 TUT1Q9H6E5 874 aaKnown RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 ERVK13-1Q9NX77 482 aa4.41□□□□□ -1.7
KPNB1-208ENST00000580019 ZFR2Q9UPR6 939 aaKnown RBP4.41□□□□□ -1.7
KPNB1-208ENST00000580019 RB1CC1Q8TDY2 1594 aa4.4□□□□□ -1.7
KPNB1-208ENST00000580019 TLDC2A0PJX2 215 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 UPK3BL1B0FP48 263 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 UPK3BL2E5RIL1 263 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 ZNF202O95125 648 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 ATP2B1P20020 1258 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 PRR5P85299 388 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 ARHGAP4P98171 946 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 HDLBPQ00341 1268 aaKnown RBP4.4□□□□□ -1.71
KPNB1-208ENST00000580019 DHX37Q8IY37 1157 aaKnown RBP4.4□□□□□ -1.71
KPNB1-208ENST00000580019 ZBTB8AQ96BR9 441 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 NOX5Q96PH1 765 aa4.4□□□□□ -1.71
KPNB1-208ENST00000580019 GPR42O15529 346 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 LMNB1P20700 586 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 MCM7P33993 719 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 MIIPQ5JXC2 388 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 TTBK2Q6IQ55 1244 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 PLEKHH3Q7Z736 793 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 SLC43A3Q8NBI5 491 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 ALG3Q92685 438 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 ARMC5Q96C12 935 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
KPNB1-208ENST00000580019 DNAJC2Q99543 621 aaKnown RBP4.39□□□□□ -1.71
KPNB1-208ENST00000580019 A0A1W2PQJ5 194 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 F8W031 263 aaPredicted RBP4.38□□□□□ -1.71
KPNB1-208ENST00000580019 MARCH6O60337 910 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 CHMP4BP1P59074 171 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 KRTAP10-11P60412 298 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 GNL2Q13823 731 aaKnown RBP4.38□□□□□ -1.71
KPNB1-208ENST00000580019 SEPT6Q14141 434 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 MRPL58Q14197 206 aaKnown RBP4.38□□□□□ -1.71
KPNB1-208ENST00000580019 SOGA3Q5TF21 947 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 C9orf131Q5VYM1 1079 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 SLFN12Q8IYM2 578 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 TMEM87AQ8NBN3 555 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 SMARCC2Q8TAQ2 1214 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 USP33Q8TEY7 942 aa4.38□□□□□ -1.71
KPNB1-208ENST00000580019 DBR1Q9UK59 544 aaKnown RBP4.38□□□□□ -1.71
KPNB1-208ENST00000580019 CCDC180Q9P1Z9 1646 aa4.37□□□□□ -1.71
KPNB1-208ENST00000580019 RPL13P26373 211 aaKnown RBP4.37□□□□□ -1.71
KPNB1-208ENST00000580019 GTF2F1P35269 517 aaKnown RBP eCLIP4.37□□□□□ -1.71
KPNB1-208ENST00000580019 CEBPAP49715 358 aaPredicted RBP4.37□□□□□ -1.71
KPNB1-208ENST00000580019 XPCQ01831 940 aaPredicted RBP4.37□□□□□ -1.71
KPNB1-208ENST00000580019 ZNF662Q6ZS27 426 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms