RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 TEX13BQ9BXU2 312 aa19.2■□□□□ 0.66
CDK5RAP3-215ENST00000579780 RIC8AQ9NPQ8 531 aa19.2■□□□□ 0.66
CDK5RAP3-215ENST00000579780 MRPL11Q9Y3B7 192 aaKnown RBP19.2■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SMCHD1A6NHR9 2005 aa19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 M0R2N6 131 aa19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SREBF2Q12772 1141 aa19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 GNL2Q13823 731 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 TNFRSF25Q93038 417 aa19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PARK7Q99497 189 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
CDK5RAP3-215ENST00000579780 BTBD18B2RXH4 712 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PDHXO00330 501 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 MRPL12P52815 198 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 INHBEP58166 350 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 GHRHRQ02643 423 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 TMEM132BQ14DG7 1078 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 TKFCQ3LXA3 575 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 REXO1Q8N1G1 1221 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 FAM43AQ8N2R8 423 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 OXER1Q8TDS5 423 aa19.18■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PIK3CDO00329 1044 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 OPLAHO14841 1288 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 TAL1P17542 331 aaPredicted RBP19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 COPB2P35606 906 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 NR5A1Q13285 461 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CLEC17AQ6ZS10 378 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CPXCR1Q8N123 301 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 AGBL1Q96MI9 1066 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PSTPIP2Q9H939 334 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 RABGAP1Q9Y3P9 1069 aa19.17■□□□□ 0.66
CDK5RAP3-215ENST00000579780 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CLK2P49760 499 aaKnown RBP19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 NOGQ13253 232 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 AP3B2Q13367 1082 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 POTEEQ6S8J3 1075 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 KRT25Q7Z3Z0 450 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SAMD3Q8N6K7 520 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PTPN18Q99952 460 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 MAF1Q9H063 256 aa19.16■□□□□ 0.66
CDK5RAP3-215ENST00000579780 IGF2BP3O00425 579 aaKnown RBP eCLIP19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CNMDO75829 334 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 ALAS1P13196 640 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 STAT3P40763 770 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 RIOX2Q8IUF8 465 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CLEC4DQ8WXI8 215 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 GBP4Q96PP9 640 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 SPATC1LQ9H0A9 340 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 RNF146Q9NTX7 359 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 BTBD7Q9P203 1132 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
CDK5RAP3-215ENST00000579780 CCDC194A0A1B0GVG4 234 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ADAMTS3O15072 1205 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 CYP2C8P10632 490 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 TRAPPC10P48553 1259 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 DEFB115Q30KQ5 88 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ATL3Q6DD88 541 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 CYP4F22Q6NT55 531 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 RASGRP4Q8TDF6 673 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 CAPNS2Q96L46 248 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ADGRA2Q96PE1 1338 aa19.14■□□□□ 0.65
CDK5RAP3-215ENST00000579780 TCHHQ07283 1943 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 NFIBO00712 420 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 MEIS2O14770 477 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 UBE2SQ16763 222 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 RILPL1Q5EBL4 403 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 IFNL1Q8IU54 200 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 REM2Q8IYK8 340 aaPredicted RBP19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 CHST13Q8NET6 341 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 PAGR1Q9BTK6 254 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 MAP3K20Q9NYL2 800 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 MORF4L1Q9UBU8 362 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 FBXO40Q9UH90 709 aa19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP3-215ENST00000579780 LCTP09848 1927 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 GCOM1H8Y6P7 765 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 BAG4O95429 457 aaKnown RBP19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 SLC25A27O95847 323 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 FOSP01100 380 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 POLR2MP0CAP2 368 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 TM4SF4P48230 202 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 HSD17B4P51659 736 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ERVK-9P63128 1117 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 ERVK-24P63145 666 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 KRT85P78386 507 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 PLS1Q14651 629 aa19.12■□□□□ 0.65
CDK5RAP3-215ENST00000579780 NONOQ15233 471 aaKnown RBP eCLIP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms