RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 F5H6K3 240 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 KCNJ6P48051 423 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 KLRC3Q07444 240 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 POLA2Q14181 598 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 TMED8Q6PL24 325 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 HFE2Q6ZVN8 426 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SUGCTQ9HAC7 445 aa15.86■□□□□ 0.13
CDK5RAP3-213ENST00000579605 POTEB3A0JP26 581 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SOWAHBA6NEL2 793 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 USP17L21D6R901 530 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 H3BQ06 376 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ATP2A1O14983 1001 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 MYL3P08590 195 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 IQCF3P0C7M6 154 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 RFC2P35250 354 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 C12orf60Q5U649 245 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 IQSEC1Q6DN90 963 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 POTEBQ6S5H4 581 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 EP400NLQ6ZTU2 488 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 FBXO16Q8IX29 292 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 STK11IPQ8N1F8 1099 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 CHST13Q8NET6 341 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ASB14A6NK59 587 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 NDUFB10O96000 172 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ATP8B2P98198 1209 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 C16orf86Q6ZW13 317 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 AMOTL1Q8IY63 956 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SSH3Q8TE77 659 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 ARHGAP45Q92619 1136 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 C1orf115Q9H7X2 142 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 SLC38A10Q9HBR0 1119 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 COG6Q9Y2V7 657 aa15.84■□□□□ 0.13
CDK5RAP3-213ENST00000579605 WDFY4Q6ZS81 3184 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 GOLIM4O00461 696 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ST18O60284 1047 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CT47B1P0C2W7 299 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 RARSP54136 660 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CHMP4BP1P59074 171 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TTF1Q15361 905 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TAPT1Q6NXT6 567 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 KIAA1211Q6ZU35 1233 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 AACSQ86V21 672 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TRMT2AQ8IZ69 625 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FAM133AQ8N9E0 248 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MFSD14AQ96MC6 490 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TGS1Q96RS0 853 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CRBNQ96SW2 442 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 DNAJC2Q99543 621 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 BCL11AQ9H165 835 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ISY1Q9ULR0 285 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-213ENST00000579605 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TCRBV5S4A2TA0A5A2 114 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MBD4O95243 580 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 WDR5P61964 334 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 DEFB103AP81534 67 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 NBPF20Q3BBV1 942 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FAM117BQ6P1L5 589 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CHMP4CQ96CF2 233 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ACAD9Q9H845 621 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 A1CFQ9NQ94 594 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 POLR3EQ9NVU0 708 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 CLIP2Q9UDT6 1046 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 NOD1Q9Y239 953 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 Q9Y3F1 56 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PARP14Q460N5 1801 aa15.82■□□□□ 0.12
CDK5RAP3-213ENST00000579605 RBAK-RBAKDNI3L0D1 243 aa15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 BAIAP3O94812 1187 aa15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ERVK-21P61565 698 aa15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PUS10Q3MIT2 529 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 RNF146Q9NTX7 359 aa15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 FEM1BQ9UK73 627 aa15.81■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TRIM27P14373 513 aa15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PURAQ00577 322 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 BFSP2Q13515 415 aa15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PRSS33Q8NF86 280 aa15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 DDRGK1Q96HY6 314 aa15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 RAD9AQ99638 391 aa15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MCM3APO60318 1980 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 LINC01553A4QN01 128 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 IPO8O15397 1037 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ALAS1P13196 640 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 ZP2Q05996 745 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 IER5LQ5T953 404 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 NEK9Q8TD19 979 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 TRERF1Q96PN7 1200 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 PURBQ96QR8 312 aaKnown RBP15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
CDK5RAP3-213ENST00000579605 MKNK2Q9HBH9 465 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms