RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 CAMTA2O94983 1202 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 DPEP1P16444 411 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 NEDD9Q14511 834 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 SURF1Q15526 300 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 CLUL1Q15846 466 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 DCUN1D2Q6PH85 259 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 NSUN6Q8TEA1 469 aaKnown RBP11.3□□□□□ -0.6
MSI2-209ENST00000579483 FAM169AQ9Y6X4 670 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 ATP8B3O60423 1300 aa11.3□□□□□ -0.6
MSI2-209ENST00000579483 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 LIFRP42702 1097 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 GNG11P61952 73 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 ASIC2Q16515 512 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 C8orf34Q49A92 452 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 ZNF34Q8IZ26 560 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 TYW5A2RUC4 315 aaKnown RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 JAK3P52333 1124 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 TRMT2AQ8IZ69 625 aaKnown RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 PPP1R14CQ8TAE6 165 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 POLR2BP30876 1174 aaKnown RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 SPP2Q13103 211 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 CGNQ9P2M7 1197 aaKnown RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 KRT9P35527 623 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 TECP42680 631 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
MSI2-209ENST00000579483 FAM204AQ9H8W3 233 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 C1orf112Q9NSG2 853 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 SYNRGQ9UMZ2 1314 aa11.29□□□□□ -0.6
MSI2-209ENST00000579483 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 ZSCAN23Q3MJ62 389 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
MSI2-209ENST00000579483 PSMD1Q99460 953 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 E9PCH4 1651 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 RGL2O15211 777 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 SPOPO43791 374 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 CETPP11597 493 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 XRCC5P13010 732 aaKnown RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 TKFCQ3LXA3 575 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 SLC9C1Q4G0N8 1177 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 APOA5Q6Q788 366 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 STMN4Q9H169 189 aaPredicted RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 TMEM110-MUSTN1A8MSY1 372 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 ADD1P35611 737 aaKnown RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 ALCAMQ13740 583 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 HHIPL2Q6UWX4 724 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 PDZD4Q76G19 769 aaPredicted RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 SH3RF3Q8TEJ3 882 aaPredicted RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 LEO1Q8WVC0 666 aaPredicted RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 LPAR1Q92633 364 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 MMP19Q99542 508 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 PIH1D3Q9NQM4 214 aaKnown RBP11.28□□□□□ -0.6
MSI2-209ENST00000579483 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 MYL3P08590 195 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 PDXDC2PQ6P474 469 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 CEP170P1Q96L14 293 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
MSI2-209ENST00000579483 PTGS1P23219 599 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 ELF1P32519 619 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 GCNAQ96QF7 691 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 HUNKP57058 714 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.6
MSI2-209ENST00000579483 NLRP7Q8WX94 980 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 ANKRD36BP1Q96IX9 119 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 PIGSQ96S52 555 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 STRBPQ96SI9 672 aaKnown RBP11.27□□□□□ -0.6
MSI2-209ENST00000579483 FTOQ9C0B1 505 aaKnown RBP eCLIP11.27□□□□□ -0.6
MSI2-209ENST00000579483 ZMYND15Q9H091 742 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 SH3GLB2Q9NR46 395 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 PARP2Q9UGN5 583 aa11.27□□□□□ -0.6
MSI2-209ENST00000579483 NRKQ7Z2Y5 1582 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 CAPN9O14815 690 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 ZNF202O95125 648 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 PPP1R2P3Q6NXS1 205 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 UBL4BQ8N7F7 174 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 MB21D1Q8N884 522 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 MMS19Q96T76 1030 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.61
MSI2-209ENST00000579483 PRDX5P30044 214 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 BPIFB4P59827 614 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 HDLBPQ00341 1268 aaKnown RBP11.27□□□□□ -0.61
MSI2-209ENST00000579483 PTH1RQ03431 593 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
MSI2-209ENST00000579483 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms