RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 BMP3P12645 472 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 CAP2P40123 477 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 NDUFA8P51970 172 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 JAG1P78504 1218 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 MKRN3Q13064 507 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 SNW1Q13573 536 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 EARS2Q5JPH6 523 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 RBM43Q6ZSC3 357 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 ZNF579Q8NAF0 562 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 RBSNQ9H1K0 784 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 PCDHA6Q9UN73 950 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 PCDHA8Q9Y5H6 950 aa19.33■□□□□ 0.68
SREBF1-218ENST00000578469 SRPRBQ9Y5M8 271 aaKnown RBP19.33■□□□□ 0.68
SREBF1-218ENST00000578469 FAM237AA0A1B0GTK4 181 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 M0R2N6 131 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 ALDH1A1P00352 501 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 PFKFB1P16118 471 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 SLC16A2P36021 539 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 RESP18Q5W5W9 173 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 FERMT2Q96AC1 680 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 MTMR8Q96EF0 704 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 FBXO2Q9UK22 296 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-218ENST00000578469 TMX2Q9Y320 296 aa19.32■□□□□ 0.68
SREBF1-218ENST00000578469 USP17L10C9JJH3 530 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 SYKP43405 635 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 ADCY7P51828 1080 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 IKQ13123 557 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-218ENST00000578469 ZNF174Q15697 407 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 DCAF15Q66K64 600 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 SHC4Q6S5L8 630 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 CDAN1Q8IWY9 1227 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 TEPSINQ96N21 525 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 FUCA2Q9BTY2 467 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 CFHR5Q9BXR6 569 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 GLT8D2Q9H1C3 349 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
SREBF1-218ENST00000578469 ZNF202O95125 648 aa19.3■□□□□ 0.68
SREBF1-218ENST00000578469 NONOQ15233 471 aaKnown RBP eCLIP19.3■□□□□ 0.68
SREBF1-218ENST00000578469 CKAP2LQ8IYA6 745 aa19.3■□□□□ 0.68
SREBF1-218ENST00000578469 REXO1Q8N1G1 1221 aaKnown RBP19.3■□□□□ 0.68
SREBF1-218ENST00000578469 COA7Q96BR5 231 aa19.3■□□□□ 0.68
SREBF1-218ENST00000578469 CLIC6Q96NY7 704 aa19.3■□□□□ 0.68
SREBF1-218ENST00000578469 A0A1W2PRG0 241 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 MRPL12P52815 198 aaKnown RBP19.29■□□□□ 0.68
SREBF1-218ENST00000578469 TRAF1Q13077 416 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 PRKG1Q13976 671 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 SYDE2Q5VT97 1194 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 BTNL9Q6UXG8 535 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 RASGRP4Q8TDF6 673 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 HPSEQ9Y251 543 aa19.29■□□□□ 0.68
SREBF1-218ENST00000578469 TMEM232C9JQI7 657 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 ATP2C1P98194 919 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-218ENST00000578469 TYRO3Q06418 890 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 PTGDRQ13258 359 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-218ENST00000578469 QRICH1Q2TAL8 776 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 UVSSAQ2YD98 709 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 CUL5Q93034 780 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 ZNF341Q9BYN7 854 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 VCPKMTQ9H867 229 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 RIC8AQ9NPQ8 531 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 PPP2R3BQ9Y5P8 575 aa19.28■□□□□ 0.68
SREBF1-218ENST00000578469 MANSC4A6NHS7 340 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 PHF20L1A8MW92 1017 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 ADAMTS3O15072 1205 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 CTNND1O60716 968 aaKnown RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 MCM7P33993 719 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 INHBEP58166 350 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 ORC2Q13416 577 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 SPRYD7Q5W111 196 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 ARL6IP4Q66PJ3 421 aaKnown RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 CHURC1Q8WUH1 139 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 HOOK1Q9UJC3 728 aaKnown RBP19.27■□□□□ 0.68
SREBF1-218ENST00000578469 KCNH3Q9ULD8 1083 aa19.27■□□□□ 0.68
SREBF1-218ENST00000578469 LAD1O00515 517 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 CAVIN2O95810 425 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 ZRSR1Q15695 479 aaKnown RBP19.26■□□□□ 0.67
SREBF1-218ENST00000578469 INF2Q27J81 1249 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 MCTP2Q6DN12 878 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 FAM160B2Q86V87 743 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 RNF214Q8ND24 703 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 CCDC34Q96HJ3 373 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 AMNQ9BXJ7 453 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
SREBF1-218ENST00000578469 BIN2Q9UBW5 565 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-218ENST00000578469 PPP1R12BO60237 982 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-218ENST00000578469 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-218ENST00000578469 STAT2P52630 851 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 LDLRAD1Q5T700 205 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 NBPF12Q5TAG4 269 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-218ENST00000578469 JAKMIP3Q5VZ66 844 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 NEK8Q86SG6 692 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 FBXO11Q86XK2 927 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
SREBF1-218ENST00000578469 SLC10A4Q96EP9 437 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms