RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 LONRF2Q1L5Z9 754 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 SLC35G1Q2M3R5 365 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 GPKOWQ92917 476 aaPredicted RBP eCLIP12.85□□□□□ -0.35
GGA3-205ENST00000578348 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CDC23Q9UJX2 597 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CCDC151A5D8V7 595 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 KLRF2D3W0D1 207 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 H0YIN7 160 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CYTH3O43739 400 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 ABL1P00519 1130 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 PICALMQ13492 652 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 E2F4Q16254 413 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 JAKMIP3Q5VZ66 844 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 WWC2Q6AWC2 1192 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 SLC35F6Q8N357 371 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 NEK11Q8NG66 645 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CALCOCO1Q9P1Z2 691 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 ITIH6Q6UXX5 1313 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 CTAGE9A4FU28 777 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 M0R2N6 131 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 STXBP3O00186 592 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 ERVK-24P63145 666 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 ABHD10Q9NUJ1 306 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 TAB2Q9NYJ8 693 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 MAPK8IP1Q9UQF2 711 aa12.84□□□□□ -0.35
GGA3-205ENST00000578348 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
GGA3-205ENST00000578348 RNF225M0QZC1 329 aaPredicted RBP12.83□□□□□ -0.35
GGA3-205ENST00000578348 PAK1Q13153 545 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 BRD3Q15059 726 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 PDXDC2PQ6P474 469 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 MTRQ99707 1265 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 PYM1Q9BRP8 204 aaKnown RBP12.83□□□□□ -0.35
GGA3-205ENST00000578348 MXD3Q9BW11 206 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.35
GGA3-205ENST00000578348 MTMR7Q9Y216 660 aa12.83□□□□□ -0.35
GGA3-205ENST00000578348 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
GGA3-205ENST00000578348 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 ADAMTS3O15072 1205 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 SCNN1DP51172 638 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
GGA3-205ENST00000578348 GYS2P54840 703 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
GGA3-205ENST00000578348 IL17AQ16552 155 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.36
GGA3-205ENST00000578348 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 CDC42EP5Q6NZY7 148 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 MRIQ9BWK5 157 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 LIMA1Q9UHB6 759 aaKnown RBP12.83□□□□□ -0.36
GGA3-205ENST00000578348 RWDD2AQ9UIY3 292 aa12.83□□□□□ -0.36
GGA3-205ENST00000578348 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 CCDC194A0A1B0GVG4 234 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 KCNJ18B7U540 433 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 HLA-DOAP06340 250 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 CRKP46108 304 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 KCNJ12Q14500 433 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 ANKRD20A12PQ8NF67 263 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 CNKSR1Q969H4 720 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 PNKPQ96T60 521 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 EP400Q96L91 3159 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 GREB1LQ9C091 1923 aaPredicted RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 RHOXF2BP0C7M4 288 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 GOLGA8HP0CJ92 632 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 FECHP22830 423 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 HDLBPQ00341 1268 aaKnown RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 SPAG1Q07617 926 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 MCM6Q14566 821 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 ASPRV1Q53RT3 343 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 TCP11X2Q5H9J9 407 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 APOBEC3HQ6NTF7 200 aaKnown RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 NAPGQ99747 312 aaPredicted RBP12.82□□□□□ -0.36
GGA3-205ENST00000578348 SLF1Q9BQI6 1058 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 RHOXF2Q9BQY4 288 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 GDAQ9Y2T3 454 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
GGA3-205ENST00000578348 LRRC10BA6NIK2 292 aa12.81□□□□□ -0.36
GGA3-205ENST00000578348 H3BQF6 201 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms